Concepedia

Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing

Xinyi Guo, Yuanyuan Zhang, Liangtao Zheng, Chunhong Zheng, Jintao Song, Qiming Zhang, Boxi Kang, Zhouzerui Liu, Liang Jin, Rui Xing,

Nature Medicine · 2018 · 1.8K citations · 39 references

Concepts

Life SciencesImmunologyOncologyCancer ImmunologyNeoplasiaSingle-cell BioinformaticsSingle-cell AnalysisSingle-cell ClusteringSingle-cell GenomicsSingle-cell Rna Sequencing AnalysisSingle-cell TranscriptomicsT Cell BiologyNon-small Cell Lung Cancer ImmunotherapySingle-cell Cancer GenomicsSingle-cell Dna SequencingSingle-cell Rna SequencingSingle-cell Tumor GenomicsTime-resolved Single-cell Analysis

References

39

Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha et al. · Proceedings of the National Academy of Sciences · 2005 · 56.7K citations · Full text

Life Sciences, Bioinformatics, Oncology +12

Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

Paul Shannon, Andrew Markiel, Owen Ozier et al. · Genome Research · 2003 · 54.3K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +17

limma powers differential expression analyses for RNA-sequencing and microarray studies

Matthew E. Ritchie, Belinda Phipson, Di Wu et al. · Nucleic Acids Research · 2015 · 43K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +17

Visualizing Data using t-SNE

Laurens van der Maaten, Geoffrey E. Hinton · Journal of Machine Learning Research · 2008 · 35.7K citations

Computing, Data Science, Visualization +13

Robust enumeration of cell subsets from tissue expression profiles

Aaron M. Newman, Chih Long Liu, Michael R. Green et al. · Nature Methods · 2015 · 14.1K citations · Full text

Life Sciences, Cell Biology, Immunology +16