eLife · 2017 · 93 citations · 80 references
Life SciencesGeneticsMolecular BiologyCell DifferentiationGene ExpressionTranscriptional RegulationCell Differentiation ControlCell PlasticityCellular PlasticityNeural DifferentiationNeural PlasticityNeuronal DifferentiationC. Elegans Developmental ModelsCell Identity PlasticityChromatin PatternNeuronal Cell-type SpecificityPlasticity-associated Gene ExpressionPlasticity-related Gene ExpressionSensory Neuron Biology
Cellular identity acquisition is typically accompanied by reduced plasticity, and terminal selector transcription factors activate identity‑specific effector genes during neuronal differentiation to define neuronal structure and function. The study aims to investigate how identity acquisition and plasticity restriction are coordinated by ectopically expressing CHE‑1, a terminal selector of ASE sensory neuron identity. Terminal selectors restrict plasticity by organizing chromatin, as evidenced by less compact chromatin at CHE‑1 target loci in selector‑deficient neurons and by H3K9 methyltransferase epistasis indicating downstream chromatin modification. Ectopic CHE‑1 activates ASE‑specific effector genes in undifferentiated cells but not in differentiated cells, yet removal of other neuron terminal selectors restores this activation, demonstrating that terminal selectors both activate identity genes and restrict plasticity by rendering non‑identity genes less accessible through chromatin remodeling.
The acquisition of a specific cellular identity is usually paralleled by a restriction of cellular plasticity. Whether and how these two processes are coordinated is poorly understood. Transcription factors called terminal selectors activate identity-specific effector genes during neuronal differentiation to define the structural and functional properties of a neuron. To study restriction of plasticity, we ectopically expressed C. elegans CHE-1, a terminal selector of ASE sensory neuron identity. In undifferentiated cells, ectopic expression of CHE-1 results in activation of ASE neuron type-specific effector genes. Once cells differentiate, their plasticity is restricted and ectopic expression of CHE-1 no longer results in activation of ASE effector genes. In striking contrast, removal of the respective terminal selectors of other sensory, inter-, or motor neuron types now enables ectopically expressed CHE-1 to activate its ASE-specific effector genes, indicating that terminal selectors not only activate effector gene batteries but also control the restriction of cellular plasticity. Terminal selectors mediate this restriction at least partially by organizing chromatin. The chromatin structure of a CHE-1 target locus is less compact in neurons that lack their resident terminal selector and genetic epistasis studies with H3K9 methyltransferases suggest that this chromatin modification acts downstream of a terminal selector to restrict plasticity. Taken together, terminal selectors activate identity-specific genes and make non-identity-defining genes less accessible, thereby serving as a checkpoint to coordinate identity specification with restriction of cellular plasticity.
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