John L. Rinn

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

Cole Trapnell, Adam Roberts, Loyal A. Goff et al. · Nature Protocols · 2012 · 12.9K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +12

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

Cole Trapnell, Davide Cacchiarelli, Jonna Grimsby et al. · Nature Biotechnology · 2014 · 7.8K citations · Full text

Life Sciences, Cell Biology, Developmental Biology +16

Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis

Rajnish A. Gupta, Nilay Shah, Jeewon Kim et al. · Nature · 2010 · 5.3K citations · Full text

Life Sciences, Cancer Biology, Molecular Biology +16

Functional Demarcation of Active and Silent Chromatin Domains in Human HOX Loci by Noncoding RNAs

John L. Rinn, Michael A. Kertesz, Jordon K. Wang et al. · Cell · 2007 · 4.3K citations · Full text

Life Sciences, Genetics, Molecular Biology +17

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

Mitchell Guttman, Ido Amit, Manuel Garber et al. · Nature · 2009 · 4.2K citations · Full text

Life Sciences, Genetics, Molecular Biology +14