Transcriptional Regulatory Networks in <i>Saccharomyces cerevisiae</i>

Tong Ihn Lee, Nicola J. Rinaldi, François Robert, +18

Science

GeneticsGene Regulatory NetworkGene TranscriptionTranscriptional RegulationMetabolic Network +18

Polycomb complexes repress developmental regulators in murine embryonic stem cells

Laurie A. Boyer, Kathrin Plath, Julia Zeitlinger, +13

Nature

Lineage PlasticityDevelopmental BiologyMedicineStem Cell ResearchCell Fate Determination +5

Transcriptional regulatory code of a eukaryotic genome

Christopher Harbison, D. Benjamin Gordon, Tong Ihn Lee, +17

Nature

Transcriptional RegulationGeneticsGene StructureGene Regulatory NetworkGene Transcription +6

Genome-Wide Location and Function of DNA Binding Proteins

Bing Ren, François Robert, John J. Wyrick, +11

Science

ChromatinSystems BiologyFunctional GenomicsGlobal Gene ExpressionNatural Sciences +13

Genome-wide Map of Nucleosome Acetylation and Methylation in Yeast

Dmitry Pokholok, Christopher Harbison, Stuart S. Levine, +11

Cell

ChromatinChromatin StructureChromatin RemodelingNatural SciencesGenetics +8

RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

Julia Zeitlinger, Alexander Stark, Manolis Kellis, +5

Nature Genetics

Transcriptional RegulationDevelopmental BiologyDrosophila Melanogaster EmbryoDevelopmental GeneticsGenetics +9

RNA polymerase is poised for activation across the genome

Ginger W. Muse, Daniel A. Gilchrist, Sergei Nechaev, +5

Nature Genetics

Transcriptional RegulationNatural SciencesGeneticsRna PolymeraseRna Biology +6

Serial Regulation of Transcriptional Regulators in the Yeast Cell Cycle

Itamar Simon, John Barnett, Nancy M. Hannett, +8

Cell

ChromatinTranscriptional RegulationGeneticsSerial RegulationGene Regulation +8

Base-resolution models of transcription-factor binding reveal soft motif syntax

Žiga Avsec, Melanie Weilert, Avanti Shrikumar, +8

Nature Genetics

Sequence MotifNatural SciencesMolecular BiologyBase-resolution ModelsGene Regulatory Network +3

Whole-genome ChIP–chip analysis of Dorsal, Twist, and Snail suggests integration of diverse patterning processes in the <i>Drosophila</i> embryo

Julia Zeitlinger, Robert P. Zinzen, Alexander Stark, +4

Genes & Development