Development of data-independent acquisition workflows for metabolomic analysis on a quadrupole-orbitrap platform

Intestinal microbiota metabolism of l-carnitine, a nutrient in red meat, promotes atherosclerosis

Robert Koeth, Zeneng Wang, Bruce S. Levison et al. · Nature Medicine · 2013 · 4.2K citations · Full text

Nutrition, Nutrient Physiology, Biochemistry +11

MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis

Hiroshi Tsugawa, Tomáš Čajka, Tobias Kind et al. · Nature Methods · 2015 · 3.2K citations · Full text

Biochemistry, Medicine, Mass Spectrometry +7

Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis

Ludovic Gillet, Pedro Navarro, Stephen Tate et al. · Molecular & Cellular Proteomics · 2012 · 2.9K citations · Full text

Extending the Limits of Quantitative Proteome Profiling with Data-Independent Acquisition and Application to Acetaminophen-Treated Three-Dimensional Liver Microtissues

Roland Bruderer, Oliver M. Bernhardt, Tejas Gandhi et al. · Molecular & Cellular Proteomics · 2015 · 1.2K citations · Full text

DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics

Chih‐Chiang Tsou, Dmitry M. Avtonomov, Brett Larsen et al. · Nature Methods · 2015 · 679 citations · Full text

Proteomic Technology, Functional Genomics, Engineering +9