PLoS ONE · 2016 · 28 citations · 15 references
MedicineOncologyRadiologyDiagnostic ImagingMetabolomicsSpectroscopyCancer DiagnosisCancer MetabolismCancer MetabolomicsMagnetic Resonance ImagingMagnetic Resonance SpectroscopyNuclear Magnetic Resonance MetabolomicsInvasive Carcinoma AssessmentMagnetic Resonance Spectroscopic ImagingMetabolic Tumor CharacterizationMetabolite DetectionNuclear Magnetic Resonance QuantificationNuclear Magnetic Resonance SpectroscopyNuclear Magnetic Resonance StudiesPreoperative Diagnoses
The purpose of this study was to evaluate the role of high-resolution magic angle spinning (HR-MAS) 1H nuclear magnetic resonance (NMR) spectroscopy in patients with ductal carcinoma in situ (DCIS) diagnosed on preoperative biopsy. We investigated whether the metabolic profiling of tissue samples using HR-MAS 1H NMR spectroscopy could be used to distinguish between DCIS lesions with or without an invasive component. Our institutional review board approved this combined retrospective and prospective study. Tissue samples were collected from 30 patients with pure DCIS and from 30 with DCIS accompanying invasive carcinoma. All patients were diagnosed with DCIS by preoperative core-needle biopsy and underwent surgical resection. The metabolic profiling of tissue samples was performed by HR-MAS 1H NMR spectroscopy. All observable metabolite signals were identified and quantified in all tissue samples. Metabolite intensity normalized by total spectral intensities was compared according to the tumor type using the Mann-Whitney test. Multivariate analysis was performed with orthogonal projections to latent structure-discriminant analysis (OPLS-DA). By univariate analysis, the metabolite concentrations of choline-containing compounds obtained with HR-MAS 1H NMR spectroscopy did not differ significantly between the pure DCIS and DCIS accompanying invasive carcinoma groups. However, the GPC/PC ratio was higher in the pure DCIS group than in the DCIS accompanying invasive carcinoma group (p = 0.004, Bonferroni-corrected p = 0.064), as well as the concentration of myo-inositol and succinate. By multivariate analysis, the OPLS-DA models built with HR-MAS MR metabolic profiles could clearly discriminate between pure DCIS and DCIS accompanying invasive carcinoma. Our preliminary results suggest that HR-MAS MR metabolomics on breast tissue may be able to distinguish between DCIS lesions with or without an invasive component.
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Rebecca L. Siegel, Deepa Naishadham, Ahmedin Jemal · CA A Cancer Journal for Clinicians · 2013 · 11.9K citations · Full text
Assessment of PLSDA cross validation
Johan A. Westerhuis, Huub C. J. Hoefsloot, Suzanne Smit et al. · Metabolomics · 2008 · 1.4K citations · Full text
Multivariate Analysis in Metabolomics
Bradley Worley, Robert Powers · Current Metabolomics · 2012 · 1.2K citations
Life Sciences, Biochemistry, Mass Spectrometric Analysis +10