Journal of the American Chemical Society · 2015 · 37 citations · 21 references
Natural SciencesBiochemistryBiophysicsBiophysical ChemistryEnzymologyProtein BiochemistryEnzyme FunctionFluorescence SpectroscopyHydration EffectsMolecular DynamicsProtein ChemistryProtein StructureAmino AcidsComputational Enzyme BiophysicsHydration PropertiesProtein - Water InteractionsProtein Dynamics AnalysisSolvation In Biomolecular SimulationsSteady-state FluorescenceUnnatural Amino Acid Incorporation
Hydration of proteins profoundly affects their functions. We describe a simple and general method for site-specific analysis of protein hydration based on the in vivo incorporation of fluorescent unnatural amino acids and their analysis by steady-state fluorescence spectroscopy. Using this method, we investigate the hydration of functionally important regions of dehalogenases. The experimental results are compared to findings from molecular dynamics simulations.
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Iterative approach to computational enzyme design
Heidi K. Privett, Gert Kiss, Toni M. Lee et al. · Proceedings of the National Academy of Sciences · 2012 · 338 citations · Full text