Asim Okur - Concepedia

Author

Asim Okur

Stony Brook University

Also Known As

Asim Okur

Publications

8.4K

Citations

H-Index

Concepts

All Affiliations

Stony Brook University Brookhaven National Laboratory National Heart Lung and Blood Institute National Institutes of Health State University of New York

About

Asim Okur is an author at Stony Brook University specializing in engineering, biophysics, and molecular dynamics.

Top Concepts

#	Concept	H-Index	Publications	Citations
1	Engineering	9	9	678
2	Medicine	4	4	128
3	Natural Sciences	2	2	175
4	Applied Physics	2	2	100
5	Biochemistry	2	2	65

Asim Okur

Publications

8.4K

Citations

H-Index

Page 1

	Year	Citations
Comparison of multiple Amber force fields and development of improved protein backbone parameters Viktor Horn̆ák, Robert Abel, Asim Okur, Proteins Structure Function and Bioinformatics	2006	7K
HIV-1 protease flaps spontaneously open and reclose in molecular dynamics simulations Viktor Horn̆ák, Asim Okur, Robert C. Rizzo, Proceedings of the National Academy of Sciences	2006	373
Evaluating the Performance of the ff99SB Force Field Based on NMR Scalar Coupling Data Lauren Wickstrom, Asim Okur, Carlos Simmerling Biophysical Journal EngineeringPhysicsMagnetic ResonanceComputer EngineeringComputational Electromagnetics	2009	210
Improved Efficiency of Replica Exchange Simulations through Use of a Hybrid Explicit/Implicit Solvation Model Asim Okur, Lauren Wickstrom, Melinda Layten, Journal of Chemical Theory and Computation Chemical KineticsEngineeringComputational ChemistryChemistryMolecular Dynamics	2006	148
Secondary Structure Bias in Generalized Born Solvent Models: Comparison of Conformational Ensembles and Free Energy of Solvent Polarization from Explicit and Implicit Solvation Daniel R. Roe, Asim Okur, Lauren Wickstrom, The Journal of Physical Chemistry B	2007	133
HIV-1 Protease Flaps Spontaneously Close to the Correct Structure in Simulations Following Manual Placement of an Inhibitor into the Open State Viktor Horn̆ák, Asim Okur, Robert C. Rizzo, Journal of the American Chemical Society	2006	108
Using PC clusters to evaluate the transferability of molecular mechanics force fields for proteins Asim Okur, Bentley Strockbine, Viktor Horn̆ák, Journal of Computational Chemistry	2002	98
Coupling of Replica Exchange Simulations to a Non-Boltzmann Structure Reservoir Adrián E. Roitberg, Asim Okur, Carlos Simmerling The Journal of Physical Chemistry B EngineeringMolecular BiologyComputational ChemistryReplica Exchange SimulationsMolecular Dynamics	2007	91
Improving Convergence of Replica-Exchange Simulations through Coupling to a High-Temperature Structure Reservoir Asim Okur, Daniel R. Roe, Guanglei Cui, Journal of Chemical Theory and Computation EngineeringMolecular BiologyReplica-exchange SimulationsMolecular DynamicsProtein Folding	2007	84
MSCALE: A General Utility for Multiscale Modeling H. Lee Woodcock, Benjamin T. Miller, Milan Hodošček, Journal of Chemical Theory and Computation	2011	52

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