Science · 2011 · 217 citations · 79 references
Life SciencesBiochemistryMolecular BiologyMolecular BiophysicsProtein TranslationStructural BiologyCryo-electron MicroscopyRibosome AssemblyRibosome StructureTranslation FactorsTranslation In EukaryotesTranslation Initiation60S Subunit JoiningAssembly Of The 40S Small Ribosomal SubunitCryo-electron Microscopy ReconstructionDegradationMrna Translation InitiationPre-ribosomal Particle AssemblyRibosome Assembly IntermediatesTranslation Initiation Complexes
Ribosome assembly in eukaryotes requires approximately 200 essential assembly factors (AFs) and occurs through ordered events that initiate in the nucleolus and culminate in the cytoplasm. Here, we present the electron cryo-microscopy (cryo-EM) structure of a late cytoplasmic 40S ribosome assembly intermediate from Saccharomyces cerevisiae at 18 angstrom resolution. We obtained cryo-EM reconstructions of preribosomal complexes lacking individual components to define the positions of all seven AFs bound to this intermediate. These late-binding AFs are positioned to prevent each step in the translation initiation pathway. Together, they obstruct the binding sites for initiation factors, prevent the opening of the messenger RNA channel, block 60S subunit joining, and disrupt the decoding site. These redundant mechanisms probably ensure that pre-40S particles do not enter the translation pathway, which would result in their rapid degradation.
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William Humphrey, Andrew Dalke, Klaus Schulten · Journal of Molecular Graphics · 1996 · 66.6K citations
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Scalable molecular dynamics with NAMD
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