cis-Decoder discovers constellations of conserved DNA sequences shared among tissue-specific enhancers

References

Page 1

	Year	Citations
<tt>BLAT</tt>—The <tt>BLAST</tt>-Like Alignment Tool W. James Kent Genome Research BiologyLong-read SequencingPhylogeneticsComparative GenomicsGenetics	2002	8.3K
A new DNA binding and dimerization motif in immunoglobulin enhancer binding, daughterless, MyoD, and myc proteins Cornelis Murre, Patrick Page-McCaw, David Baltimore Cell ChromatinImmunogeneticsProtein FunctionDimerization MotifNatural Sciences	1989	2.7K
Evidence for stabilizing selection in a eukaryotic enhancer element Michael Ludwig, Casey Bergman, Nipam H. Patel, Nature BiologyNatural SciencesGeneticsGenomic MechanismGene Structure	2000	584
Independent regulatory elements in the nestin gene direct transgene expression to neural stem cells or muscle precursors Lyle B. Zimmerman, Urban Lendahl, Miles G. Cunningham, Neuron Embryonic Stem CellTranscriptional RegulationCell LineageDevelopmental BiologyMuscle Precursors	1994	583
Regulation of even-skipped stripe 2 in the Drosophila embryo. Stephen Small, Alan Blair, Michael Levine The EMBO Journal Transcriptional RegulationDevelopmental BiologyDevelopmental GeneticsGeneticsMedicine	1992	533
Human-mouse genome comparisons to locate regulatory sites Wyeth W. Wasserman, Michael J. Palumbo, William A. Thompson, Nature Genetics Functional GenomicsGene Sequence AnnotationGeneticsComputational GenomicsRegulatory Sites	2000	483
Transient and restricted expression during mouse embryogenesis of <i>Dll1</i>, a murine gene closely related to <i>Drosophila Delta</i> Berthold Bettenhausen, Martin Hrabě de Angelis, Dominique Simon, Development	1995	453
Determination of spatial domains of zygotic gene expression in the Drosophila embryo by the affinity of binding sites for the bicoid morphogen Wolfgang Driever, Gudrun Thoma, Christiane Nüsslein‐Volhard Nature BiologyPattern FormationDevelopmental BiologyZygotic Gene ExpressionMedicine	1989	436
Control elements of the Drosophila segmentation gene fushi tarazu Yasushi Hiromi, Atsushi Kuroiwa, Walter J. Gehring Cell Pattern FormationControl ElementsGeneticsGene StructureMorphogenesis	1985	400
Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the <i>Drosophila</i> embryo Michele Markstein, Peter Markstein, Vicky Markstein, Proceedings of the National Academy of Sciences	2001	375

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