Concepedia

Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing

Zhigang Xue, Kevin Huang, Chaochao Cai, Lingbo Cai, Chunyan Jiang, Yun Feng, Zhenshan Liu, Qiao Zeng, Liming Cheng, Yi Eve Sun,

Nature · 2013 · 1K citations · 33 references

Open access

Concepts

Life SciencesDevelopmental BiologyGeneticsEmbryogenesisGene ExpressionTranscriptomicsDevelopmental TranscriptomicsLineage TracingSingle-cell AnalysisSingle-cell GenomicsSingle-cell Rna Sequencing AnalysisSingle-cell TranscriptomicsCell Cycle Control In Early EmbryosSingle-cell Analysis Of EmbryosSingle-cell Genetic AnalysisSingle-cell Rna SequencingSingle-cell Rna Sequencing Cell Type AnnotationSingle-cell Transcriptomics Of Early Embryos

References

33

Fast and accurate short read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text

Life Sciences, Bioinformatics, Biology +12

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang, Brad T. Sherman, Richard A. Lempicki · Nature Protocols · 2008 · 37.4K citations

Life Sciences, Bioinformatics, Molecular Biology +5

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

Aaron McKenna, Matthew G. Hanna, Eric Banks et al. · Genome Research · 2010 · 30K citations · Full text

Life Sciences, Bioinformatics, Genetics +17

WGCNA: an R package for weighted correlation network analysis

Peter Langfelder, Steve Horvath · BMC Bioinformatics · 2008 · 29.1K citations · Full text

Life Sciences, Bioinformatics, Systems Biology +15

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

Kai Wang, Man Li, Håkon Håkonarson · Nucleic Acids Research · 2010 · 15.6K citations · Full text

Life Sciences, Bioinformatics, Genetics +17