Concepedia

Phylogenetic placement of diverse amoebae inferred from multigene analyses and assessment of clade stability within ‘Amoebozoa’ upon removal of varying rate classes of SSU-rDNA

Yonas I. Tekle, Jessica R. Grant, O. Roger Anderson, Thomas A. Nerad, J.C. Cole, David J. Patterson, Laura A. Katz

Molecular Phylogenetics and Evolution · 2007 · 105 citations · 47 references

References

47

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Julie Thompson, Desmond G. Higgins, Toby J. Gibson · Nucleic Acids Research · 1994 · 64.9K citations · Full text

Life Sciences, Bioinformatics, Sequence Analysis +14

MrBayes 3: Bayesian phylogenetic inference under mixed models

Fredrik Ronquist, John P. Huelsenbeck · Bioinformatics · 2003 · 29.4K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +17

ProtTest: selection of best-fit models of protein evolution

Federico Abascal, Rafael Zardoya, David Posada · Computer applications in the biosciences · 2005 · 3.1K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +17

HyPhy: hypothesis testing using phylogenies

Sergei L. Kosakovsky Pond, Simon D. W. Frost, Spencer V. Muse · Bioinformatics · 2004 · 3K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +16

The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions

Linda Medlin, Hille J. Elwood, Shawn K. Stickel et al. · Gene · 1988 · 3K citations

Life Sciences, Microbiology, Molecular Biology +9