Protein Engineering Design and Selection · 2014 · 21 citations · 13 references
EngineeringBioinformaticsBiologyComputational BiologyDirected EvolutionDrug DiscoveryEpistasisHigh-throughput ScreeningLibrary ScreeningMutation ScreeningScreening AssaysScreening Of MutantsDirected Evolution ScreeningEpistatic Interaction AnalysisEpistatic InteractionsHigh-throughput Mutant ScreeningMutant IdentificationMutant LibrariesMutant Library ScreeningSequence Data Integration
In directed evolution experiments, it is at stake to have methods to screen efficiently the mutant libraries. We propose a web-based tool that implements an established in silico method for the rational screening of mutant libraries. The method, known as ProSAR, attempts to link sequence data to activity. The method uses statistical models trained on small experimental datasets provided by the user. These can integrate potential epistatic interactions between mutations and be used in many diverse biological contexts. It drastically improves the search for leading mutants. The tool is freely available to non-commercial users at http://bo-protscience.fr/prosar/.
13
David J. Hand, Heikki Mannila, Padhraic Smyth · 2001 · 2.4K citations
Natural Selection and the Concept of a Protein Space
John Maynard Smith · Nature · 1970 · 971 citations
David Broadhurst, Royston Goodacre, A. R. Jones et al. · Analytica Chimica Acta · 1997 · 297 citations