Journal of Microbiology and Biotechnology · 2013 · 35 citations · 27 references
Life SciencesBiotechnologyMicrobiologyBacteriologyBiosensorsDiagnostic MicrobiologyNucleic Acid Amplification TestingPathogen DetectionPolymerase Chain ReactionSignal Amplification StrategiesEscherichia ColiEscherichia Coli O157 DetectionIsothermal AmplificationIsothermal Amplification AssaysLoop-mediated Isothermal AmplificationLoop-mediated Isothermal Amplification (Lamp)Pathogen Detection By AmplificationRapid Detection Assays
Conventional molecular detection methods cannot distinguish between viable and dead Escherichia coli O157 cells. In this study, the loop-mediated isothermal amplification (LAMP) method combined with propidium monoazide (PMA) treatment was developed to selectively detect viable E. coli O157 cells. Four primers, including outer primers and inner primers, were specially designed for the recognition of six distinct sequences on the serogroups (O157) of the specific rfbE gene of the E. coli O157 genome. PMA selectively penetrated through the compromised cell membranes and intercalated into DNA. Amplification of DNA from dead cells was completely inhibited by 3.0 μg/ml PMA, whereas the DNA derived from viable cells was amplified remarkably within 1 h by PMA-LAMP. Exhibiting high sensitivity and specificity, PMA-LAMP is a suitable method for evaluating the inactivation efficacy of slightly acidic electrolyzed water in broth. PMA-LAMP can selectively detect viable E. coli O157 cells. This study offers a novel molecular detection method to distinguish between viable and dead E. coli O157 cells.
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Loop-mediated isothermal amplification of DNA
Tsugunori Notomi · Nucleic Acids Research · 2000 · 8.8K citations · Full text
Andreas Nocker, Ching-Ying Cheung, Anne K. Camper · Journal of Microbiological Methods · 2006 · 1.1K citations