Science · 2013 · 820 citations · 62 references
Virus StructureCrystal StructureTrimer StructureHuman RetrovirusImmunologyAntiviral ResponseMolecular BiologyVirologyTrimer ApexImmune SystemHivImmunotherapyMedicineViral Structural ProteinCrystallographyStructural Biology
HIV-1 entry into CD4(+) target cells is mediated by cleaved envelope glycoprotein (Env) trimers that have been challenging to characterize structurally. Here, we describe the crystal structure at 4.7 angstroms of a soluble, cleaved Env trimer that is stabilized and antigenically near-native (termed the BG505 SOSIP.664 gp140 trimer) in complex with a potent broadly neutralizing antibody, PGT122. The structure shows a prefusion state of gp41, the interaction between the component gp120 and gp41 subunits, and how a close association between the gp120 V1/V2/V3 loops stabilizes the trimer apex around the threefold axis. The complete epitope of PGT122 on the trimer involves gp120 V1, V3, and several surrounding glycans. This trimer structure advances our understanding of how Env functions and is presented to the immune system, and provides a blueprint for structure-based vaccine design.
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<i>PHENIX</i>: a comprehensive Python-based system for macromolecular structure solution
Paul D. Adams, Pavel V. Afonine, G. Bunkóczi et al. · Acta Crystallographica Section D Biological Crystallography · 2010 · 24.1K citations · Full text
X-ray Crystallography, Structural Bioinformatics, Biomolecular Structure Prediction +14
<i>Phaser</i>crystallographic software
Airlie J. McCoy, Ralf W. Grosse‐Kunstleve, Paul D. Adams et al. · Journal of Applied Crystallography · 2007 · 20.6K citations · Full text
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