Concepedia

Multiplexed chromosome conformation capture sequencing for rapid genome-scale high-resolution detection of long-range chromatin interactions

Ralph Stadhouders, Petros Kolovos, Rutger W. W. Brouwer, Jessica Zuin, Anita van den Heuvel, Christel Kockx, Robert‐Jan Palstra, Kerstin S. Wendt, Frank Grosveld, Wilfred F. J. van IJcken,

Nature Protocols · 2013 · 150 citations · 27 references

DOI

Concepts

References

27

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 28.9K citations · Full text

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead, Cole Trapnell, Mihai Pop et al. · Genome biology · 2009 · 22.5K citations · Full text

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

Erez Lieberman-Aiden, Nynke L. van Berkum, Louise Williams et al. · Science · 2009 · 9.3K citations · Full text

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Topological domains in mammalian genomes identified by analysis of chromatin interactions

Jesse R. Dixon, Siddarth Selvaraj, Feng Yue et al. · Nature · 2012 · 7.2K citations · Full text

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Capturing Chromosome Conformation

Job Dekker, Karsten Rippe, Martijn Dekker et al. · Science · 2002 · 3.7K citations