PLoS ONE · 2011 · 57 citations · 38 references
FSHD-1 and FSHD-2 cells showed, in different steps of myogenic differentiation, a global deregulation of gene expression rather than an alteration of expression of 4q35 specific genes. In general, FSHD-1 and FSHD-2 global gene deregulation interested common and distinctive biological processes. In this regard, defects of cell cycle progression (FSHD-1 and to a lesser extent FSHD-2), protein synthesis and degradation (FSHD-2), response to oxidative stress (FSHD-1 and FSHD-2), and cholesterol homeostasis (FSHD-1 and FSHD-2) may in general impair a correct myogenesis. Taken together our results recapitulate previously reported defects of FSHD-1, and add new insights into the gene deregulation characterizing both FSHD-1 and FSHD-2, in which miRNAs may play a role.
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DAVID: Database for Annotation, Visualization, and Integrated Discovery
Glynn Dennis, Brad T. Sherman, Douglas A Hosack et al. · Genome biology · 2003 · 9.4K citations · Full text
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
Eran Eden, Roy Navon, Israel Steinfeld et al. · BMC Bioinformatics · 2009 · 3.6K citations · Full text