Journal of Synchrotron Radiation · 2014 · 103 citations · 13 references
Natural SciencesInformation TechnologyBiomedical ImagingDiagnostic ImagingSpectroscopyData ExchangeData ProvenanceX-ray Data AnalysisX-ray DetectionX-ray Fluorescence AnalysisX-ray SpectroscopyData Model DesignData Provenance ModelingFluorescence TomographyImage Provenance TrackingProvenance CaptureProvenance ModelsProvenance TrackingScientific Data Analysis
Data Exchange is a simple data model designed to interface, or `exchange', data among different instruments, and to enable sharing of data analysis tools. Data Exchange focuses on technique rather than instrument descriptions, and on provenance tracking of analysis steps and results. In this paper the successful application of the Data Exchange model to a variety of X-ray techniques, including tomography, fluorescence spectroscopy, fluorescence tomography and photon correlation spectroscopy, is described.
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Biological imaging software tools
Kevin W. Eliceiri, Michael R. Berthold, I. Goldberg et al. · Nature Methods · 2012 · 567 citations
Unifying biological image formats with HDF5
Matthew T. Dougherty, Michael Folk, Erez Zadok et al. · Communications of the ACM · 2009 · 57 citations · Full text