Biological imaging software tools

Fiji: an open-source platform for biological-image analysis

Johannes Schindelin, Ignacio Arganda‐Carreras, Erwin Frise et al. · Nature Methods · 2012 · 70.9K citations

Engineering, Bioinformatics, Biology +9

NIH Image to ImageJ: 25 years of image analysis

Caroline A Schneider, Wayne Rasband, Kevin W. Eliceiri · Nature Methods · 2012 · 65.2K citations

Arts, Computer Science, Visualization +9

Image processing with ImageJ

Michael D. Abràmoff, Paulo Magalhães, Sunanda J. Ram · Data Archiving and Networked Services (DANS) · 2004 · 11.9K citations · Full text

Arts, Computer Science, Biomedical Imaging +16

Computer Visualization of Three-Dimensional Image Data Using IMOD

James R. Kremer, David N. Mastronarde, J. Richard McIntosh · Journal of Structural Biology · 1996 · 6K citations

Computing, Visualization, Computer Graphics +13

CellProfiler: image analysis software for identifying and quantifying cell phenotypes

Anne E. Carpenter, Thouis R. Jones, Michael R. Lamprecht et al. · Genome biology · 2006 · 5.5K citations · Full text

Life Sciences, Cell Biology, Molecular Biology +14