Concepedia

Flexible Fitting of High-Resolution X-Ray Structures into Cryoelectron Microscopy Maps Using Biased Molecular Dynamics Simulations

Marek Orzechowski, Florence Tama

Biophysical Journal · 2008 · 117 citations · 51 references

DOIFull text

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Concepts

References

51

Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features

Wolfgang Kabsch, Christian Sander · Biopolymers · 1983 · 15.7K citations · Full text

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A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

Wendy D. Cornell, Piotr Cieplak, Christopher I. Bayly et al. · Journal of the American Chemical Society · 1995 · 13.1K citations

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The Amber biomolecular simulation programs

David A. Case, Thomas E. Cheatham, Tom Darden et al. · Journal of Computational Chemistry · 2005 · 9.6K citations · Full text

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Flexible Fitting of Atomic Structures into Electron Microscopy Maps Using Molecular Dynamics

Leonardo G. Trabuco, Elizabeth Villa, Kakoli Mitra et al. · Structure · 2008 · 915 citations · Full text

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Conformational change of proteins arising from normal mode calculations

Florence Tama, Yves‐Henri Sanejouand · Protein Engineering Design and Selection · 2001 · 895 citations

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