Global Optimization in Systems Biology: Stochastic Methods and Their Applications

COPASI—a COmplex PAthway SImulator

Stefan Hoops, Sven Sahle, Ralph Gauges et al. · Bioinformatics · 2006 · 2.7K citations · Full text

Engineering, Bioengineering, Systems Biology +14

Metaheuristics from design to implementation

El‐Ghazali Talbi · HAL (Le Centre pour la Communication Scientifique Directe) · 2009 · 2.5K citations

Computing, Bioinformatics, Computer Science +17

A Multiple Shooting Algorithm for Direct Solution of Optimal Control Problems *

H.G. Bock, K.J. Plitt · IFAC Proceedings Volumes · 1984 · 1.3K citations

Natural Sciences, Mechanical Engineering, Optimization +2

Parameter Estimation in Biochemical Pathways: A Comparison of Global Optimization Methods

Carmen G. Moles, Pedro Mendes, Julio R. Banga · Genome Research · 2003 · 872 citations · Full text

Engineering, Bioinformatics, Chemical Engineering +16

Advances in flux balance analysis

Kenneth J. Kauffman, Purusharth Prakash, Jeremy S. Edwards · Current Opinion in Biotechnology · 2003 · 765 citations

Natural Sciences, Earth Sciences, Meteorology +11