Concepedia

Transcript Structure Prediction

Transcript Structure Prediction is a computational method that identifies and characterizes the structural organization of transcripts, including exon-intron boundaries, splice variants, and untranslated regions, by distinguishing primary sequence signals from genomic and transcriptomic data to infer biologically accurate transcript architectures.

50

Publications

8.1K

Citations

279

Authors

115

Institutions

Publications per year

2017–2026

9

Parents

Publications

50

GeneWise and Genomewise

Ewan Birney, Michèle Clamp, Richard Durbin · Genome Research · 2004 · 3.1K citations · Full text

, , +14

Predicting Splicing from Primary Sequence with Deep Learning

Kishore Jaganathan, Sofia Kyriazopoulou Panagiotopoulou, Jeremy F. McRae et al. · Cell · 2019 · 2.9K citations · Full text

, , +14

Structured RNAs in the ENCODE selected regions of the human genome

Stefan Washietl, Jakob Skou Pedersen, Jan O. Korbel et al. · Genome Research · 2007 · 177 citations · Full text

, , +17

Global or local? Predicting secondary structure and accessibility in mRNAs

Sita J. Lange, Daniel Maticzka, Mathias Möhl et al. · Nucleic Acids Research · 2012 · 163 citations · Full text

, , +13

Predicting three-dimensional genome structure from transcriptional activity

Peter R. Cook · Nature Genetics · 2002 · 162 citations

, , +10

1–5 of 50

Authors

279

  1. FP
    Frederick P. Roth

    Harvard University, United States

    2 publications · 32 citations

    2

    h-index

  2. YL
    Yang Li

    University of Chicago, United States

    2 publications · 2.9K citations

    2

    h-index

  3. MS
    Mikhail S. Gelfand

    Institute for Information Transmission Problems, Russia

    2 publications · 66 citations

    2

    h-index

  4. SS
    Samuel S. Gross

    Washington University in St. Louis, United States

    2 publications · 142 citations

    2

    h-index

  5. MS
    M Snyder

    Stanford University, United States

    2 publications · 196 citations

    2

    h-index

1–5 of 279

Institutions

115

  1. Stanford University

    Stanford, United States

    4 h-index

    10 publications

    6.4K citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    3 h-index

    13 publications

    393 citations

  3. Wellcome Sanger Institute

    Cambridge, United Kingdom

    3 h-index

    15 publications

    9.7K citations

  4. Dana-Farber Cancer Institute

    Boston, United States

    2 h-index

    16 publications

    214 citations

  5. University of Toronto

    Toronto, Canada

    2 h-index

    5 publications

    96 citations

  6. Broad Institute

    Cambridge, United States

    2 h-index

    2 publications

    3K citations

  7. Universidade de São Paulo

    São Paulo, Brazil

    2 h-index

    2 publications

    76 citations

  8. Tsinghua University

    Beijing, China

    2 h-index

    7 publications

    99 citations

1–8 of 115

Venues

  1. Genome Research

    GR · 7 publications · 3.4K citations

    7

    h-index

  2. Nucleic Acids Research

    7 publications · 477 citations

    7

    h-index

  3. BMC Bioinformatics

    4 publications · 95 citations

    4

    h-index

  4. Genome biology

    4 publications · 190 citations

    4

    h-index

  5. Journal of Computational Biology

    2 publications · 27 citations

    2

    h-index

1–5