Concepedia

Template-based Refinement

Template-Based Refinement is a computational method in structural bioinformatics that improves the accuracy of protein structure predictions by iteratively optimizing the alignment and spatial coordinates of a target sequence relative to a known template structure.

58

Publications

9.5K

Citations

185

Authors

85

Institutions

Publications per year

2017–2026

17

Parents

Publications

58

Template-based protein structure modeling using the RaptorX web server

Morten Källberg, Haipeng Wang, Sheng Wang et al. · Nature Protocols · 2012 · 1.7K citations · Full text

, , +11

GalaxyRefine: protein structure refinement driven by side-chain repacking

Lim Heo, Hahnbeom Park, Chaok Seok · Nucleic Acids Research · 2013 · 1.4K citations · Full text

, , +15

GalaxyWEB server for protein structure prediction and refinement

Jin Hwan Ko, Hahnbeom Park, Lim Heo et al. · Nucleic Acids Research · 2012 · 1K citations · Full text

, , +17

<i>CHAINSAW</i>: a program for mutating pdb files used as templates in molecular replacement

Norman Stein · Journal of Applied Crystallography · 2008 · 556 citations

, , +17

Structure prediction for CASP8 with all‐atom refinement using Rosetta

Srivatsan Raman, Robert M. Vernon, James Thompson et al. · Proteins Structure Function and Bioinformatics · 2009 · 527 citations · Full text

, , +13

1–5 of 58

Authors

185

  1. CS
    Chaok Seok

    Seoul National University, South Korea

    6 publications · 2.7K citations

    6

    h-index

  2. DB
    David Baker

    University of Washington, United States

    6 publications · 1.4K citations

    6

    h-index

  3. HP
    Hahnbeom Park

    University of Washington, United States

    6 publications · 2.7K citations

    6

    h-index

  4. LH
    Lim Heo

    Seoul National University, South Korea

    6 publications · 2.7K citations

    6

    h-index

  5. MF
    Michael Feig

    Michigan State University, United States

    5 publications · 348 citations

    5

    h-index

1–5 of 185

Institutions

85

  1. University of Washington

    Seattle, United States

    8 h-index

    57 publications

    15.1K citations

  2. Seoul National University

    Seoul, South Korea

    7 h-index

    25 publications

    9.3K citations

  3. Michigan State University

    East Lansing, United States

    5 h-index

    11 publications

    662 citations

  4. Howard Hughes Medical Institute

    Chevy Chase, United States

    3 h-index

    8 publications

    2.8K citations

  5. Princeton University

    Princeton, United States

    3 h-index

    8 publications

    307 citations

  6. Georgia Institute of Technology

    Atlanta, United States

    3 h-index

    11 publications

    588 citations

  7. Toyota Technological Institute at Chicago

    Chicago, United States

    3 h-index

    14 publications

    11.7K citations

  8. University of Reading

    Reading, United Kingdom

    2 h-index

    10 publications

    568 citations

1–8 of 85

Venues

  1. Proteins Structure Function and Bioinformatics

    20 publications · 2.5K citations

    19

    h-index

  2. Journal of Chemical Theory and Computation

    JCTC · 4 publications · 190 citations

    4

    h-index

  3. Journal of Molecular Biology

    JMB · 4 publications · 486 citations

    4

    h-index

  4. Nucleic Acids Research

    3 publications · 2.4K citations

    3

    h-index

  5. 2

    h-index

1–5