ColabFold: making protein folding accessible to all

Milot Mirdita, Konstantin Schütze, Yoshitaka Moriwaki, +3

Nature Methods

GalaxyRefine: protein structure refinement driven by side-chain repacking

Lim Heo, Hahnbeom Park, Chaok Seok

Nucleic Acids Research

Protein AssemblyBiomolecular Structure PredictionProtein FoldingNatural SciencesStructural Bioinformatics +13

GalaxyWEB server for protein structure prediction and refinement

Jin Hwan Ko, Hahnbeom Park, Lim Heo, +1

Nucleic Acids Research

Web ServerStructural BioinformaticsBiomolecular Structure PredictionProtein FoldingMedicine +11

ColabFold - Making protein folding accessible to all

Milot Mirdita, Konstantin Schütze, Yoshitaka Moriwaki, +3

Protein AssemblyBiomolecular Structure PredictionStructural BioinformaticsMolecular BiologyFoldable Structure +17

GalaxyPepDock: a protein–peptide docking tool based on interaction similarity and energy optimization

Hasup Lee, Lim Heo, Myeong Sup Lee, +1

Nucleic Acids Research

Multi‐state modeling of G‐protein coupled receptors at experimental accuracy

Lim Heo, Michael Feig

Proteins Structure Function and Bioinformatics

High AccuracyG-protein Coupled ReceptorsMulti‐state ModelingBiochemistryG Protein-coupled Receptor +13

Direct generation of protein conformational ensembles via machine learning

Giacomo Janson, Gilberto Valdés‐García, Lim Heo, +1

Nature Communications

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment

Marc F. Lensink, Sameer Velankar, Andriy Kryshtafovych, +99

Proteins Structure Function and Bioinformatics

Structural BioinformaticsBiomolecular Structure PredictionMolecular BiologyProtein DockingAnalytical Ultracentrifugation +15

Prediction of Protein Structure and Interaction by GALAXY Protein Modeling Programs

Woong‐Hee Shin, Gyu Rie Lee, Lim Heo, +2

Structural BioinformaticsBiomolecular Structure PredictionProtein FoldingMedicineNatural Sciences +10

GalaxyHomomer: a web server for protein homo-oligomer structure prediction from a monomer sequence or structure

Minkyung Baek, Taeyong Park, Lim Heo, +2

Nucleic Acids Research

Proper Oligomer TemplatesStructural BioinformaticsBiomolecular Structure PredictionMolecular BiologyHomo-oligomer Templates +15