Concepedia

Taxonomic Binning

Taxonomic Binning is the computational process of assigning sequencing reads to specific taxonomic groups based on their evolutionary or phylogenetic origin, distinguishing it from other classification methods by its focus on reconstructing the taxonomic composition of microbial communities from metagenomic data.

199

Publications

16.3K

Citations

722

Authors

355

Institutions

Publications per year

2017–2026

68

Parents

Publications

199

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data

Evguenia Kopylova, Laurent Noé, Hélène Touzet · Bioinformatics · 2012 · 3.3K citations · Full text

, , +13

Assessing and Improving Methods Used in Operational Taxonomic Unit-Based Approaches for 16S rRNA Gene Sequence Analysis

Patrick D. Schloss, Sarah L. Westcott · Applied and Environmental Microbiology · 2011 · 757 citations · Full text

, , +16

The use of bioacoustics in anuran taxonomy: theory, terminology, methods and recommendations for best practice

Jörn Köhler, Martin Jansen, Ariel Rodríguez et al. · Zootaxa · 2017 · 651 citations

, , +17

Minimum entropy decomposition: Unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences

A. Murat Eren, Hilary G. Morrison, Pamela J. Lescault et al. · The ISME Journal · 2014 · 641 citations · Full text

, , +17

Robust taxonomic classification of uncharted microbial sequences and bins with CAT and BAT

F. A. Bastiaan von Meijenfeldt, Ksenia Arkhipova, Diego D. Cambuy et al. · Genome biology · 2019 · 593 citations · Full text

, , +17

1–5 of 199

Authors

722

  1. AC
    Alice C. McHardy

    Helmholtz Centre for Infection Research, Germany

    8 publications · 845 citations

    8

    h-index

  2. JD
    Johannes Dröge

    Helmholtz Centre for Infection Research, Germany

    6 publications · 680 citations

    6

    h-index

  3. DH
    Daniel H. Huson

    University of Tübingen, Germany

    4 publications · 596 citations

    4

    h-index

  4. SS
    Sharmila S. Mande

    Tata Consultancy Services (India), India

    4 publications · 271 citations

    4

    h-index

  5. FY
    Francis Y. L. Chin

    University of Hong Kong, Hong Kong SAR China

    4 publications · 246 citations

    4

    h-index

1–5 of 722

Institutions

355

  1. Helmholtz Centre for Infection Research

    Braunschweig, Germany

    7 h-index

    31 publications

    3.7K citations

  2. Heinrich Heine University Düsseldorf

    Düsseldorf, Germany

    6 h-index

    22 publications

    2.6K citations

  3. Centre National de la Recherche Scientifique

    Paris, France

    5 h-index

    20 publications

    10.6K citations

  4. University of Hong Kong

    Pok Fu Lam, Hong Kong

    5 h-index

    28 publications

    1.8K citations

  5. Bielefeld University

    Bielefeld, Germany

    4 h-index

    12 publications

    660 citations

  6. Tata Consultancy Services (India)

    Pune, India

    4 h-index

    17 publications

    1.1K citations

  7. Fudan University

    Shanghai, China

    4 h-index

    8 publications

    385 citations

  8. Universidade Federal do Rio de Janeiro

    Rio de Janeiro, Brazil

    4 h-index

    4 publications

    890 citations

1–8 of 355

Venues

  1. Bioinformatics

    15 publications · 4.2K citations

    14

    h-index

  2. BMC Bioinformatics

    11 publications · 493 citations

    11

    h-index

  3. PLoS ONE

    10 publications · 927 citations

    10

    h-index

  4. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 8 publications · 406 citations

    8

    h-index

  5. Zootaxa

    5 publications · 730 citations

    5

    h-index

1–5