Concepedia

Supervised Cell Type Annotation

Supervised Cell Type Annotation is a computational method in single-cell genomics that, as a member of the broader category of cell type annotation approaches, specifically employs labeled training data to guide the assignment of cell types to unlabeled cells based on gene expression profiles.

12

Publications

1.3K

Citations

59

Authors

27

Institutions

Publications per year

2017–2026

12

Parents

Publications

12

scBERT as a large-scale pretrained deep language model for cell type annotation of single-cell RNA-seq data

Fan Yang, Wenchuan Wang, Fang Wang et al. · Nature Machine Intelligence · 2022 · 588 citations

, , +15

SciBet as a portable and fast single cell type identifier

Chenwei Li, Baolin Liu, Boxi Kang et al. · Nature Communications · 2020 · 187 citations · Full text

, , +16

Evaluation of Cell Type Annotation R Packages on Single-Cell RNA-Seq Data

Qianhui Huang, Yu Liu, Yuheng Du et al. · Genomics Proteomics & Bioinformatics · 2020 · 158 citations · Full text

, , +15

Cell type annotation of single-cell chromatin accessibility data via supervised Bayesian embedding

Xiaoyang Chen, Shengquan Chen, Shuang Song et al. · Nature Machine Intelligence · 2022 · 98 citations

, , +15

A web server for comparative analysis of single-cell RNA-seq data

Amir Alavi, Matthew Ruffalo, Aiyappa Parvangada et al. · Nature Communications · 2018 · 62 citations · Full text

, , +15

1–5 of 12

Authors

59

  1. DT
    Duyu Tang

    Harbin Institute of Technology, China

    2 publications · 612 citations

    2

    h-index

  2. YF
    Yuan Fang

    University of British Columbia, Canada

    2 publications · 612 citations

    2

    h-index

  3. FW
    Fang Wang

    Tencent (China), China

    2 publications · 612 citations

    2

    h-index

  4. JH
    Junzhou Huang

    The University of Texas at Arlington, United States

    2 publications · 612 citations

    2

    h-index

  5. WW
    Wenchuan Wang

    Beijing University of Chemical Technology, China

    2 publications · 612 citations

    2

    h-index

1–5 of 59

Institutions

27

  1. The University of Texas at Arlington

    Arlington, United States

    2 h-index

    2 publications

    612 citations

  2. Harvard University

    Cambridge, United States

    2 h-index

    2 publications

    612 citations

  3. Shanghai Children's Hospital

    Shanghai, China

    2 h-index

    2 publications

    612 citations

  4. Tencent (China)

    Shenzhen, China

    2 h-index

    12 publications

    3.7K citations

  5. Shanghai Jiao Tong University

    Shanghai, China

    2 h-index

    4 publications

    1.2K citations

  6. Northwestern Polytechnical University

    Xi'an, China

    1 h-index

    3 publications

    51 citations

  7. Technical University of Munich

    Munich, Germany

    1 h-index

    2 publications

    72 citations

  8. Griffith University

    Brisbane, Australia

    1 h-index

    1 publications

    41 citations

1–8 of 27

Venues

  1. Nature Machine Intelligence

    2 publications · 686 citations

    2

    h-index

  2. Briefings in Bioinformatics

    2 publications · 98 citations

    2

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 60 citations

    2

    h-index

  4. Nature Communications

    2 publications · 249 citations

    2

    h-index

  5. Scientific Reports

    1 publications · 13 citations

    1

    h-index

1–5