Concepedia

Subnetwork Enrichment Analysis

Subnetwork Enrichment Analysis is a computational method in network-based biomarker discovery that identifies biologically meaningful subnetworks within a larger molecular interaction network by assessing the statistical overrepresentation of functionally related gene or protein sets, thereby distinguishing itself from broader network analysis techniques through its focused evaluation of localized topological and functional enrichment.

113

Publications

7.9K

Citations

681

Authors

265

Institutions

Publications per year

2017–2026

45

Parents

Publications

113

Discovering regulatory and signalling circuits in molecular interaction networks

Trey Ideker, Owen Ozier, Benno Schwikowski et al. · Bioinformatics · 2002 · 1.2K citations

, , +15

pathfindR: An R Package for Comprehensive Identification of Enriched Pathways in Omics Data Through Active Subnetworks

Ege Ülgen, Osman Uğur Sezerman · Frontiers in Genetics · 2019 · 500 citations · Full text

, , +12

Algorithms for Detecting Significantly Mutated Pathways in Cancer

Fabio Vandin, Eli Upfal, Benjamin J. Raphael · Journal of Computational Biology · 2011 · 448 citations

, , +15

dmGWAS: dense module searching for genome-wide association studies in protein–protein interaction networks

Peilin Jia, Siyuan Zheng, Jirong Long et al. · Bioinformatics · 2010 · 291 citations

, , +17

A Markov random field model for network-based analysis of genomic data

Zhi Wei, Hongzhe Li · Bioinformatics · 2007 · 257 citations · Full text

, , +13

1–5 of 113

Authors

681

  1. OU
    Osman Uğur Sezerman

    Sabancı Üniversitesi, Türkiye

    3 publications · 570 citations

    3

    h-index

  2. EÜ
    Ege Ülgen

    Kent Hastanesi, Türkiye

    3 publications · 570 citations

    3

    h-index

  3. BJ
    Benjamin J. Raphael

    Princeton University, United States

    3 publications · 718 citations

    3

    h-index

  4. ZZ
    Zhongming Zhao

    The University of Texas Health Science Center at Houston, United States

    3 publications · 360 citations

    3

    h-index

  5. RZ
    Ralf Zimmer

    Ludwig-Maximilians-Universität München, Germany

    2 publications · 31 citations

    2

    h-index

1–5 of 681

Institutions

265

  1. Imperial College London

    London, United Kingdom

    6 h-index

    15 publications

    614 citations

  2. Icahn School of Medicine at Mount Sinai

    New York, United States

    5 h-index

    53 publications

    4.4K citations

  3. University of Florida

    Gainesville, United States

    4 h-index

    10 publications

    537 citations

  4. Harvard University

    Cambridge, United States

    4 h-index

    9 publications

    851 citations

  5. Acıbadem Adana Hospital

    Adana, Turkey

    3 h-index

    6 publications

    1.1K citations

  6. Shanghai Jiao Tong University

    Shanghai, China

    3 h-index

    16 publications

    499 citations

  7. Dana-Farber Cancer Institute

    Boston, United States

    3 h-index

    6 publications

    612 citations

  8. Université Paris Cité

    Paris, France

    3 h-index

    18 publications

    432 citations

1–8 of 265

Venues

  1. Bioinformatics

    21 publications · 3K citations

    18

    h-index

  2. BMC Bioinformatics

    9 publications · 439 citations

    9

    h-index

  3. PLoS ONE

    6 publications · 340 citations

    6

    h-index

  4. Scientific Reports

    4 publications · 126 citations

    4

    h-index

  5. PLoS Computational Biology

    4 publications · 304 citations

    4

    h-index

1–5