Concepedia

Structural Variation Handling

Structural Variation Handling is a computational method in reference-guided assembly that identifies, characterizes, and incorporates large-scale genomic alterations—such as insertions, deletions, inversions, and translocations—distinguishing itself from standard alignment procedures by explicitly resolving disparities between sequencing reads and the reference genome arising from structural differences.

12

Publications

981

Citations

68

Authors

30

Institutions

Publications per year

2017–2026

6

Parents

Publications

12

Efficient assembly of nanopore reads via highly accurate and intact error correction

Ying Chen, Fan Nie, Yingfeng Zheng et al. · Nature Communications · 2021 · 464 citations · Full text

, , +15

Behavioral and procedural consequences of structural variation in value trees

Mari Pöyhönen, Hans Vrolijk, Raimo P. Hämäläinen · European Journal of Operational Research · 2001 · 95 citations

, , +11

An improved approach for accurate and efficient calling of structural variations with low-coverage sequence data

Jin Zhang, Jiayin Wang, Yufeng Wu · BMC Bioinformatics · 2012 · 88 citations · Full text

, , +11

A graph-based approach to diploid genome assembly

Shilpa Garg, Mikko Rautiainen, Adam M. Novak et al. · Bioinformatics · 2018 · 80 citations · Full text

, , +17

ViVar: A Comprehensive Platform for the Analysis and Visualization of Structural Genomic Variation

Tom Sante, Sarah Vergult, Pieter‐Jan Volders et al. · PLoS ONE · 2014 · 62 citations · Full text

, , +17

1–5 of 12

Authors

68

  1. DW
    Depeng Wang

    Grandomics (China), China

    1 publications · 464 citations

    1

    h-index

  2. PD
    Patrick Doreian

    University of Pittsburgh, United States

    1 publications · 48 citations

    1

    h-index

  3. AA
    Anunchai Assawamakin

    Mahidol University, Thailand

    1 publications · 27 citations

    1

    h-index

  4. BM
    Björn Menten

    Ghent University Hospital, Belgium

    1 publications · 62 citations

    1

    h-index

  5. YZ
    Yingfeng Zheng

    Sun Yat-sen University, China

    1 publications · 464 citations

    1

    h-index

1–5 of 68

Institutions

30

  1. Wellcome Sanger Institute

    Cambridge, United Kingdom

    2 h-index

    4 publications

    230 citations

  2. Hainan University

    Haikou, China

    1 h-index

    1 publications

    464 citations

  3. Ghent University

    Ghent, Belgium

    1 h-index

    9 publications

    558 citations

  4. Siriraj Hospital

    Bangkok, Thailand

    1 h-index

    1 publications

    27 citations

  5. Universidad de Murcia

    Murcia, Spain

    1 h-index

    3 publications

    51 citations

  6. University of Helsinki

    Helsinki, Finland

    1 h-index

    3 publications

    285 citations

  7. Oxford Nanopore Technologies (United Kingdom)

    Oxford, United Kingdom

    1 h-index

    1 publications

    464 citations

  8. National Center for Genetic Engineering and Biotechnology

    Pathum Thani, Thailand

    1 h-index

    7 publications

    189 citations

1–8 of 30

Venues

  1. BMC Genomics

    2 publications · 41 citations

    2

    h-index

  2. BMC Bioinformatics

    1 publications · 88 citations

    1

    h-index

  3. Methods in molecular biology

    Book series · 1 publications · 35 citations

    1

    h-index

  4. IEEE Transactions on Knowledge and Data Engineering

    TKDE · 1 publications · 17 citations

    1

    h-index

  5. Bioinformatics

    1 publications · 80 citations

    1

    h-index

1–5