Concepedia

Splicing Quantification

Splicing Quantification is a computational method that quantifies the relative abundance of alternatively spliced transcript isoforms from high-throughput RNA sequencing data, distinguishing itself by specifically measuring splicing variation rather than overall gene expression.

231

Publications

21.9K

Citations

1.2K

Authors

464

Institutions

Publications per year

2017–2026

81

Parents

Publications

231

rMATS: Robust and flexible detection of differential alternative splicing from replicate RNA-Seq data

Shihao Shen, Juw Won Park, Zhixiang Lu et al. · Proceedings of the National Academy of Sciences · 2014 · 2.9K citations · Full text

, , +16

Annotation-free quantification of RNA splicing using LeafCutter

Yang Li, David A. Knowles, Jack Humphrey et al. · Nature Genetics · 2017 · 849 citations · Full text

, , +10

Statistically based splicing detection reveals neural enrichment and tissue-specific induction of circular RNA during human fetal development

Linda Szabo, Robert Morey, Nathan J. Palpant et al. · Genome biology · 2015 · 644 citations · Full text

, , +17

A new view of transcriptome complexity and regulation through the lens of local splicing variations

Jorge Vaquero-Garcia, Alejandro Barrera, Matthew R. Gazzara et al. · eLife · 2016 · 549 citations · Full text

, , +16

Frequent Alternative Splicing of Human Genes

Andrey A. Mironov, James W. Fickett, Mikhail S. Gelfand · Genome Research · 1999 · 549 citations · Full text

, , +13

1–5 of 231

Authors

1.2K

  1. YB
    Yoseph Barash

    University of Pennsylvania, United States

    8 publications · 865 citations

    8

    h-index

  2. NF
    Nicholas F. Lahens

    University of Pennsylvania, United States

    6 publications · 1K citations

    6

    h-index

  3. BJ
    Benjamin J. Blencowe

    University of Toronto, Canada

    6 publications · 1.3K citations

    6

    h-index

  4. GR
    Gregory R. Grant

    University of Pennsylvania, United States

    5 publications · 460 citations

    5

    h-index

  5. KH
    Kevin Ha

    University of Toronto, Canada

    4 publications · 950 citations

    4

    h-index

1–5 of 1.2K

Institutions

464

  1. University of Pennsylvania

    Philadelphia, United States

    13 h-index

    68 publications

    8.7K citations

  2. Universitat Pompeu Fabra

    Barcelona, Spain

    11 h-index

    34 publications

    7.2K citations

  3. Centre National de la Recherche Scientifique

    Paris, France

    11 h-index

    56 publications

    3.4K citations

  4. Stanford University

    Stanford, United States

    10 h-index

    45 publications

    7.7K citations

  5. University of Toronto

    Toronto, Canada

    9 h-index

    39 publications

    9.5K citations

  6. Centre for Genomic Regulation

    Barcelona, Spain

    8 h-index

    20 publications

    5.4K citations

  7. Children's Hospital of Philadelphia

    Philadelphia, United States

    7 h-index

    11 publications

    917 citations

  8. Inserm

    Paris, France

    7 h-index

    39 publications

    2.6K citations

1–8 of 464

Venues

  1. Nucleic Acids Research

    20 publications · 1.7K citations

    18

    h-index

  2. Bioinformatics

    19 publications · 1K citations

    17

    h-index

  3. BMC Bioinformatics

    13 publications · 597 citations

    13

    h-index

  4. Genome biology

    10 publications · 1.8K citations

    10

    h-index

  5. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 8 publications · 568 citations

    8

    h-index

1–5