Concepedia

Splice Variant Annotation

Splice Variant Annotation is a computational or bioinformatics methodology that systematically identifies, classifies, and characterizes alternatively spliced transcript isoforms by mapping exon-intron structures to genomic sequences and delineating their functional and structural distinctions.

302

Publications

43.2K

Citations

2.1K

Authors

640

Institutions

Publications per year

2017–2026

67

Parents

Publications

302

TopHat: discovering splice junctions with RNA-Seq

Cole Trapnell, Lior Pachter, Steven L. Salzberg · Bioinformatics · 2009 · 12.1K citations · Full text

, , +16

AUGUSTUS: ab initio prediction of alternative transcripts

Mario Stanke, O. Keller, Irfan Gunduz et al. · Nucleic Acids Research · 2006 · 3K citations · Full text

, , +14

Using native and syntenically mapped cDNA alignments to improve <i>de novo</i> gene finding

Mario Stanke, Mark Diekhans, Robert Baertsch et al. · Bioinformatics · 2008 · 2.6K citations · Full text

, , +14

Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies

Brian Haas · Nucleic Acids Research · 2003 · 2.5K citations · Full text

, , +17

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

Martin Ringwald · Nature · 2002 · 1.6K citations · Full text

, , +16

1–5 of 302

Authors

2.1K

  1. ML
    Michael L. Tress

    Spanish National Cancer Research Centre, Spain

    6 publications · 633 citations

    6

    h-index

  2. RM
    Rajasree Menon

    University of Michigan, United States

    4 publications · 161 citations

    4

    h-index

  3. PG
    Panagiotis G. Adamopoulos

    National and Kapodistrian University of Athens, Greece

    4 publications · 95 citations

    4

    h-index

  4. YS
    Yutaka Suzuki

    The University of Tokyo, Japan

    4 publications · 165 citations

    4

    h-index

  5. JM
    José Manuel Rodrı́guez

    Spanish National Cancer Research Centre, Spain

    4 publications · 592 citations

    4

    h-index

1–5 of 2.1K

Institutions

640

  1. Inserm

    Paris, France

    10 h-index

    75 publications

    5.2K citations

  2. European Bioinformatics Institute

    Cambridge, United Kingdom

    10 h-index

    46 publications

    9K citations

  3. Johns Hopkins University

    Baltimore, United States

    9 h-index

    55 publications

    4.2K citations

  4. Johns Hopkins Medicine

    Baltimore, United States

    8 h-index

    31 publications

    1.8K citations

  5. University of Toronto

    Toronto, Canada

    8 h-index

    29 publications

    5.3K citations

  6. National Institutes of Health

    Bethesda, United States

    8 h-index

    34 publications

    3K citations

  7. The University of Queensland

    Brisbane, Australia

    7 h-index

    31 publications

    3.3K citations

  8. University of Michigan

    Ann Arbor, United States

    7 h-index

    21 publications

    1.4K citations

1–8 of 640

Venues

  1. Nucleic Acids Research

    34 publications · 8.4K citations

    26

    h-index

  2. Bioinformatics

    19 publications · 15.7K citations

    15

    h-index

  3. PLoS ONE

    14 publications · 827 citations

    14

    h-index

  4. Gene

    11 publications · 612 citations

    11

    h-index

  5. BMC Genomics

    11 publications · 852 citations

    11

    h-index

1–5