Concepedia

Spatial Omics Benchmarking

Spatial Omics Benchmarking is a systematic evaluation framework that establishes standardized criteria and metrics for assessing the performance, accuracy, and applicability of computational methods in integrating and analyzing spatially resolved multi-omics data.

7

Publications

623

Citations

70

Authors

40

Institutions

Publications per year

2017–2026

7

Parents

Publications

7

DeepST: identifying spatial domains in spatial transcriptomics by deep learning

Chang Xu, Xiyun Jin, Songren Wei et al. · Nucleic Acids Research · 2022 · 320 citations · Full text

, , +17

Virtual alignment of pathology image series for multi-gigapixel whole slide images

Chandler Gatenbee, Ann‐Marie Baker, Sandhya Prabhakaran et al. · Nature Communications · 2023 · 88 citations · Full text

, , +17

Optimal transport for single-cell and spatial omics

Charlotte Bunne, Geoffrey Schiebinger, Andreas Krause et al. · Nature Reviews Methods Primers · 2024 · 54 citations

, , +14

In silico tissue generation and power analysis for spatial omics

Ethan A. G. Baker, Denis Schapiro, Bianca Dumitrascu et al. · Nature Methods · 2023 · 54 citations · Full text

, , +13

Precision medicine in colorectal cancer: Leveraging multi-omics, spatial omics, and artificial intelligence

Zishan Xu, Wei Li, Xiangyang Dong et al. · Clinica Chimica Acta · 2024 · 52 citations

, , +17

1–5 of 7

Authors

70

  1. AR
    Aviv Regev

    Broad Institute, United States

    2 publications · 108 citations

    2

    h-index

  2. JY
    Joe Yeong

    Singapore General Hospital, Singapore

    1 publications · 21 citations

    1

    h-index

  3. AM
    Andriy Marusyk

    Moffitt Cancer Center, United States

    1 publications · 88 citations

    1

    h-index

  4. ZX
    Zhaochun Xu

    Harbin Institute of Technology, China

    1 publications · 320 citations

    1

    h-index

  5. WY
    Wenyi Yang

    Institute of Atmospheric Physics, China

    1 publications · 320 citations

    1

    h-index

1–5 of 70

Institutions

40

  1. Queen Mary University of London

    London, United Kingdom

    1 h-index

    3 publications

    264 citations

  2. University Hospital Heidelberg

    Heidelberg, Germany

    1 h-index

    1 publications

    54 citations

  3. Henan Medical University

    Xinxiang, China

    1 h-index

    7 publications

    364 citations

  4. The University of Queensland

    Brisbane, Australia

    1 h-index

    2 publications

    42 citations

  5. Southern Medical University

    Guangzhou, China

    1 h-index

    2 publications

    640 citations

  6. Skin Cancer Foundation

    New York, United States

    1 h-index

    1 publications

    54 citations

  7. Massachusetts Institute of Technology

    Cambridge, United States

    1 h-index

    2 publications

    108 citations

  8. Shanghai Center for Brain Science and Brain-Inspired Technology

    Shanghai, China

    1 h-index

    1 publications

    320 citations

1–8 of 40

Venues

  1. Nature Methods

    2 publications · 88 citations

    2

    h-index

  2. Nucleic Acids Research

    1 publications · 320 citations

    1

    h-index

  3. Nature Reviews Methods Primers

    1 publications · 54 citations

    1

    h-index

  4. Current Opinion in Biotechnology

    1 publications · 21 citations

    1

    h-index

  5. Nature Communications

    1 publications · 88 citations

    1

    h-index

1–5