Concepedia

Spatial Microbiome Profiling

Spatial Microbiome Profiling is a microbial omics integration method that integrates high-resolution spatial mapping techniques with microbiome analysis to resolve the precise geographical distribution and taxonomic composition of microbial communities within a host-associated or environmental habitat.

11

Publications

1K

Citations

73

Authors

37

Institutions

Publications per year

2017–2026

9

Variants

Spatial Microbiome Mapping

Parents

Publications

11

Quantitative Imaging of Gut Microbiota Spatial Organization

Kristen Earle, Gabriel Billings, Michael Sigal et al. · Cell Host & Microbe · 2015 · 451 citations · Full text

, , +14

Spatial heterogeneity of the microbiome and metabolome profiles of high-temperature Daqu in the same workshop

Wei Shi, Li‐Juan Chai, Guan-Yu Fang et al. · Food Research International · 2022 · 144 citations

, , +17

Spatial host–microbiome sequencing reveals niches in the mouse gut

Britta Lötstedt, Martin Stražar, Ramnik J. Xavier et al. · Nature Biotechnology · 2023 · 117 citations · Full text

, , +17

Spatial profiling of microbial communities by sequential FISH with error-robust encoding

Zhaohui Cao, Wenlong Zuo, Lanxiang Wang et al. · Nature Communications · 2023 · 72 citations · Full text

, , +17

Tracing seafood at high spatial resolution using NGS-generated data and machine learning: Comparing microbiome versus SNPs

Massimo Milan, Francesco Maroso, Giulia Dalla Rovere et al. · Food Chemistry · 2019 · 51 citations · Full text

, , +15

1–5 of 11

Authors

73

  1. MS
    Martin Stražar

    Broad Institute, United States

    2 publications · 130 citations

    2

    h-index

  2. AR
    Aviv Regev

    Broad Institute, United States

    2 publications · 130 citations

    2

    h-index

  3. SV
    Sanja Vicković

    Science for Life Laboratory, Sweden

    2 publications · 130 citations

    2

    h-index

  4. RJ
    Ramnik J. Xavier

    Massachusetts General Hospital, United States

    2 publications · 130 citations

    2

    h-index

  5. BL
    Britta Lötstedt

    Science for Life Laboratory, Sweden

    2 publications · 130 citations

    2

    h-index

1–5 of 73

Institutions

37

  1. Massachusetts General Hospital

    Boston, United States

    3 h-index

    4 publications

    198 citations

  2. Broad Institute

    Cambridge, United States

    3 h-index

    14 publications

    786 citations

  3. Massachusetts Institute of Technology

    Cambridge, United States

    3 h-index

    5 publications

    294 citations

  4. Harvard University

    Cambridge, United States

    2 h-index

    3 publications

    81 citations

  5. KTH Royal Institute of Technology

    Stockholm, Sweden

    2 h-index

    2 publications

    130 citations

  6. New York Genome Center

    New York, United States

    2 h-index

    3 publications

    247 citations

  7. Stanford University

    Stanford, United States

    2 h-index

    15 publications

    3.8K citations

  8. Science for Life Laboratory

    Stockholm, Sweden

    2 h-index

    4 publications

    260 citations

1–8 of 37

Venues

  1. Nature Communications

    2 publications · 106 citations

    2

    h-index

  2. Journal of Cleaner Production

    1 publications · 39 citations

    1

    h-index

  3. Microbial Ecology

    1 publications · 38 citations

    1

    h-index

  4. Food Research International

    1 publications · 144 citations

    1

    h-index

  5. Food Chemistry

    1 publications · 51 citations

    1

    h-index

1–5