Concepedia

Single-cell Omics Integration

Single-Cell Omics Integration is a computational framework that combines multiple types of omics data at the individual cell level to reconstruct comprehensive molecular profiles, distinguished from bulk-level integration methods by its resolution of cellular heterogeneity and capture of cell-specific regulatory dynamics.

89

Publications

21.4K

Citations

1K

Authors

301

Institutions

Publications per year

2017–2026

82

Parents

Publications

89

Fast, sensitive and accurate integration of single-cell data with Harmony

Ilya Korsunsky, Nghia Millard, Jean Fan et al. · Nature Methods · 2019 · 10.5K citations · Full text

, , +14

Single-Cell Multi-omic Integration Compares and Contrasts Features of Brain Cell Identity

Joshua D. Welch, Velina Kozareva, Ashley N. Ferreira et al. · Cell · 2019 · 1.4K citations · Full text

, , +16

Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022

Yongbiao Xue, Yīmíng Bào, Zhang Zhang et al. · Nucleic Acids Research · 2021 · 1.1K citations · Full text

, , +17

scGPT: toward building a foundation model for single-cell multi-omics using generative AI

Haotian Cui, Hassaan Maan, Kuan Pang et al. · Nature Methods · 2024 · 1K citations

, , +14

Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas

Yu Hou, Huahu Guo, Chen Cao et al. · Cell Research · 2016 · 685 citations · Full text

, , +17

1–5 of 89

Authors

1K

  1. LW
    Lin Wan

    Academy of Mathematics and Systems Science, China

    4 publications · 279 citations

    4

    h-index

  2. KC
    Kai Cao

    Chinese Academy of Sciences, China

    4 publications · 279 citations

    4

    h-index

  3. YH
    Yiguang Hong

    Chinese Academy of Sciences, China

    4 publications · 279 citations

    4

    h-index

  4. JD
    Joshua D. Welch

    University of Michigan, United States

    3 publications · 1.5K citations

    3

    h-index

  5. FJ
    Fabian J. Theis

    Helmholtz Zentrum München, Germany

    3 publications · 528 citations

    3

    h-index

1–5 of 1K

Institutions

301

  1. Chinese Academy of Sciences

    Beijing, China

    8 h-index

    22 publications

    1.6K citations

  2. Harvard University

    Cambridge, United States

    7 h-index

    52 publications

    107.1K citations

  3. Broad Institute

    Cambridge, United States

    6 h-index

    48 publications

    82.2K citations

  4. University of Michigan

    Ann Arbor, United States

    6 h-index

    14 publications

    1.5K citations

  5. Memorial Sloan Kettering Cancer Center

    New York, United States

    5 h-index

    8 publications

    365 citations

  6. Karolinska Institutet

    Stockholm, Sweden

    5 h-index

    9 publications

    511 citations

  7. University of Chinese Academy of Sciences

    Beijing, China

    5 h-index

    14 publications

    965 citations

  8. Sun Yat-sen University

    Guangzhou, China

    4 h-index

    23 publications

    1.9K citations

1–8 of 301

Venues

  1. Nature Communications

    10 publications · 526 citations

    10

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 9 publications · 233 citations

    9

    h-index

  3. Bioinformatics

    8 publications · 425 citations

    8

    h-index

  4. Nature Methods

    5 publications · 12.5K citations

    5

    h-index

  5. Nucleic Acids Research

    5 publications · 1.7K citations

    5

    h-index

1–5