Single-Cell Multi-omic Integration Compares and Contrasts Features of Brain Cell Identity

Joshua D. Welch, Velina Kozareva, Ashley N. Ferreira, +2

Cell

Neuroimaging BiomarkersContrasts FeaturesNeuroanatomyMedicineMulti-omics Study +10

Dissection of artifactual and confounding glial signatures by single-cell sequencing of mouse and human brain

Samuel E. Marsh, Alec J. Walker, Tushar Kamath, +20

Nature Neuroscience

Neurodegenerative DiseasesGlial SignaturesNeuroanatomyMedicineSingle Cell Sequencing +10

A transcriptomic atlas of mouse cerebellar cortex comprehensively defines cell types

Velina Kozareva, Caroline Martin, Tomás Osorno, +7

Nature

Jointly defining cell types from multiple single-cell datasets using LIGER

Jialin Liu, Chao Gao, Joshua Sodicoff, +3

Nature Protocols

EngineeringData ScienceSingle Cell SequencingMedicineSingle-cell Biology +10

A high-efficiency AAV for endothelial cell transduction throughout the central nervous system

Trevor Krolak, Ken Y. Chan, Luke Kaplan, +12

Nature Cardiovascular Research

Endothelial Cell PathobiologyAngiogenesisCell SignalingImmunologyEndothelial Dysfunction +9

A transcriptomic atlas of the mouse cerebellum reveals regional specializations and novel cell types

Velina Kozareva, Caroline Martin, Tomás Osorno, +7

NeurogenomicsSynaptic TransmissionGranule NeuronsCellular NeurobiologySynaptic Signaling +25

Integrative inference of brain cell similarities and differences from single-cell genomics

Joshua D. Welch, Velina Kozareva, Ashley N. Ferreira, +2

EngineeringMultiomicsSpatial OmicsGene Expression ProfilingEpigenetics +19

Candelabrum cells are ubiquitous cerebellar cortex interneurons with specialized circuit properties

Tomás Osorno, Stephanie Rudolph, Tri Nguyen, +6

Nature Neuroscience

Brain CircuitryNeurophysiologyNeuroanatomyCellular NeuroscienceNeural Circuits +10

Single Cell Sequencing Reveals Glial Specific Responses to Tissue Processing & Enzymatic Dissociation in Mice and Humans

Samuel E. Marsh, Tushar Kamath, Alec J. Walker, +16

Glial BiologyNeurogenomicsCellular PhysiologySocial SciencesNeuroinflammation +21

Jointly Defining Cell Types from Multiple Single-Cell Datasets Using LIGER

Jialin Liu, Chao Gao, Joshua Sodicoff, +3