Concepedia

Single-cell Enhancer Analysis

Single-Cell Enhancer Analysis is a computational and molecular genomics approach that identifies and characterizes enhancer elements at the resolution of individual cells, enabling the inference of cell-type-specific regulatory activity through the analysis of epigenomic signatures such as chromatin accessibility, histone modifications, or transcription factor binding in single-cell assays.

16

Publications

1K

Citations

204

Authors

78

Institutions

Publications per year

2017–2026

14

Parents

Publications

16

Multiplexed Engineering and Analysis of Combinatorial Enhancer Activity in Single Cells

Shiqi Xie, Jialei Duan, Boxun Li et al. · Molecular Cell · 2017 · 357 citations · Full text

, , +14

EnhancerAtlas: a resource for enhancer annotation and analysis in 105 human cell/tissue types

Tianshun Gao, Bing He, Sheng Liu et al. · Bioinformatics · 2016 · 185 citations · Full text

, , +11

C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution

Tsukasa Kouno, Jonathan Moody, Andrew Tae-Jun Kwon et al. · Nature Communications · 2019 · 102 citations · Full text

, , +17

EP-DNN: A Deep Neural Network-Based Global Enhancer Prediction Algorithm

Seong‐Gon Kim, Mrudul Harwani, Ananth Grama et al. · Scientific Reports · 2016 · 59 citations · Full text

, , +12

Global Analysis of Enhancer Targets Reveals Convergent Enhancer-Driven Regulatory Modules

Shiqi Xie, Daniel Armendariz, Pei Zhou et al. · Cell Reports · 2019 · 55 citations · Full text

, , +14

1–5 of 16

Authors

204

  1. MB
    Michael B. Brenner

    Brigham and Women's Hospital, United States

    2 publications · 67 citations

    2

    h-index

  2. SK
    Sachi Kato

    RIKEN Center for Integrative Medical Sciences, Japan

    2 publications · 114 citations

    2

    h-index

  3. CH
    Chung-Chau Hon

    RIKEN Center for Integrative Medical Sciences, Japan

    2 publications · 114 citations

    2

    h-index

  4. AM
    Andrew McDavid

    Harvard University, United States

    2 publications · 67 citations

    2

    h-index

  5. HS
    Harukazu Suzuki

    RIKEN Center for Integrative Medical Sciences, Japan

    2 publications · 114 citations

    2

    h-index

1–5 of 204

Institutions

78

  1. RIKEN Center for Integrative Medical Sciences

    Yokohama, Japan

    4 h-index

    55 publications

    2.9K citations

  2. National Institutes of Health

    Bethesda, United States

    2 h-index

    4 publications

    132 citations

  3. National Institute of Allergy and Infectious Diseases

    Bethesda, United States

    2 h-index

    4 publications

    132 citations

  4. Brigham and Women's Hospital

    Boston, United States

    2 h-index

    50 publications

    2.2K citations

  5. Cornell University

    Ithaca, United States

    2 h-index

    9 publications

    389 citations

  6. Broad Institute

    Cambridge, United States

    2 h-index

    37 publications

    1.6K citations

  7. University of California, Berkeley

    Berkeley, United States

    2 h-index

    12 publications

    208 citations

  8. Stanford University

    Stanford, United States

    2 h-index

    11 publications

    513 citations

1–8 of 78

Venues

  1. Developmental Cell

    1 publications · 35 citations

    1

    h-index

  2. Bioinformatics

    1 publications · 185 citations

    1

    h-index

  3. Nucleic Acids Research

    1 publications · 28 citations

    1

    h-index

  4. Cell Reports

    1 publications · 55 citations

    1

    h-index

  5. Molecular Cell

    1 publications · 357 citations

    1

    h-index

1–5