Concepedia

Single-cell Data Harmonization

Single-Cell Data Harmonization is a computational framework designed to integrate and remove technical variability across single-cell omics datasets while preserving biological heterogeneity, enabling consistent comparative analysis across diverse experimental conditions or batches.

54

Publications

22.6K

Citations

714

Authors

170

Institutions

Publications per year

2017–2026

50

Parents

Publications

54

Fast, sensitive and accurate integration of single-cell data with Harmony

Ilya Korsunsky, Nghia Millard, Jean Fan et al. · Nature Methods · 2019 · 10.5K citations · Full text

, , +14

xCell: digitally portraying the tissue cellular heterogeneity landscape

Dvir Aran, Zicheng Hu, Atul J. Butte · Genome biology · 2017 · 4.7K citations · Full text

, , +15

Fast, sensitive, and accurate integration of single cell data with Harmony

Ilya Korsunsky, Jean Fan, Kamil Slowikowski et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2018 · 828 citations · Full text

, , +17

Probabilistic harmonization and annotation of single‐cell transcriptomics data with deep generative models

Chenling Xu, Romain Lopez, Edouard Mehlman et al. · Molecular Systems Biology · 2021 · 699 citations · Full text

, , +17

Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data

Daniel Dimitrov, Dénes Türei, Martín Garrido‐Rodríguez et al. · Nature Communications · 2022 · 586 citations · Full text

, , +16

1–5 of 54

Authors

714

  1. SP
    Stefan Peidli

    Charité - Universitätsmedizin Berlin, Germany

    4 publications · 222 citations

    4

    h-index

  2. JS
    Julio Sáez-Rodríguez

    Heidelberg University, Germany

    4 publications · 1.4K citations

    4

    h-index

  3. FJ
    Fabian J. Theis

    Helmholtz Zentrum München, Germany

    3 publications · 424 citations

    3

    h-index

  4. AV
    Alberto Valdeolivas

    Heidelberg University, Germany

    3 publications · 994 citations

    3

    h-index

  5. CS
    Chris Sander

    Memorial Sloan Kettering Cancer Center, United States

    3 publications · 210 citations

    3

    h-index

1–5 of 714

Institutions

170

  1. Broad Institute

    Cambridge, United States

    8 h-index

    37 publications

    79.6K citations

  2. Wellcome Sanger Institute

    Cambridge, United Kingdom

    7 h-index

    33 publications

    6.1K citations

  3. Harvard University

    Cambridge, United States

    6 h-index

    36 publications

    114.2K citations

  4. Chinese Academy of Sciences

    Beijing, China

    5 h-index

    12 publications

    763 citations

  5. Stanford University

    Stanford, United States

    5 h-index

    37 publications

    7.4K citations

  6. Heidelberg University

    Heidelberg, Germany

    4 h-index

    23 publications

    8.5K citations

  7. Charité - Universitätsmedizin Berlin

    Berlin, Germany

    4 h-index

    5 publications

    239 citations

  8. RWTH Aachen University

    Aachen, Germany

    4 h-index

    8 publications

    2.7K citations

1–8 of 170

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 11 publications · 1.8K citations

    11

    h-index

  2. Nucleic Acids Research

    10 publications · 1.2K citations

    10

    h-index

  3. Nature Methods

    3 publications · 10.7K citations

    3

    h-index

  4. Nature Communications

    3 publications · 825 citations

    3

    h-index

  5. Frontiers in Immunology

    2 publications · 52 citations

    2

    h-index

1–5