Concepedia

Sequence Profile Analysis

Sequence Profile Analysis is a computational method in protein fold recognition that derives position-specific scoring profiles from multiple sequence alignments to enhance the detection of distant evolutionary relationships by capturing conserved patterns of amino acid substitutions distinct from simple sequence similarity.

335

Publications

75.6K

Citations

1.1K

Authors

460

Institutions

Publications per year

2017–2026

40

Parents

Publications

335

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

Julie Thompson · Nucleic Acids Research · 1997 · 39.2K citations · Full text

, , +13

Multiple Sequence Alignment Using ClustalW and ClustalX

Julie Thompson, Toby J. Gibson, Desmond G. Higgins · Current Protocols in Bioinformatics · 2002 · 3.1K citations

, , +14

ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins

Edouard de Castro, Christian J A Sigrist, Alexandre Gattiker et al. · Nucleic Acids Research · 2006 · 1.7K citations · Full text

, , +17

Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

Matteo Pellegrini, Edward M. Marcotte, Michael J. Thompson et al. · Proceedings of the National Academy of Sciences · 1999 · 1.6K citations · Full text

, , +17

Profile analysis: detection of distantly related proteins.

Michael Gribskov, A. McLachlan, David Eisenberg · Proceedings of the National Academy of Sciences · 1987 · 1.3K citations · Full text

, , +13

1–5 of 335

Authors

1.1K

  1. LA
    L. Aravind

    National Center for Biotechnology Information, United States

    21 publications · 3.5K citations

    21

    h-index

  2. LM
    Lakshminarayan M. Iyer

    National Center for Biotechnology Information, United States

    10 publications · 1.2K citations

    10

    h-index

  3. VA
    Vivek Anantharaman

    National Center for Biotechnology Information, United States

    8 publications · 1.3K citations

    8

    h-index

  4. NV
    Nick V. Grishin

    The University of Texas Southwestern Medical Center, United States

    6 publications · 962 citations

    6

    h-index

  5. XW
    Xiaolong Wang

    Harbin Institute of Technology, China

    6 publications · 967 citations

    6

    h-index

1–5 of 1.1K

Institutions

460

  1. National Institutes of Health

    Bethesda, United States

    28 h-index

    70 publications

    11.6K citations

  2. National Center for Biotechnology Information

    Bethesda, United States

    28 h-index

    67 publications

    10.7K citations

  3. Howard Hughes Medical Institute

    Chevy Chase, United States

    10 h-index

    22 publications

    3K citations

  4. Centre National de la Recherche Scientifique

    Paris, France

    8 h-index

    25 publications

    885 citations

  5. European Molecular Biology Laboratory

    Heidelberg, Germany

    7 h-index

    8 publications

    4K citations

  6. Harbin Institute of Technology

    Harbin, China

    7 h-index

    27 publications

    3.4K citations

  7. San Diego Supercomputer Center

    San Diego, United States

    6 h-index

    10 publications

    1.8K citations

  8. Ludwig-Maximilians-Universität München

    Munich, Germany

    5 h-index

    11 publications

    522 citations

1–8 of 460

Venues

  1. Nucleic Acids Research

    34 publications · 47.8K citations

    30

    h-index

  2. Bioinformatics

    31 publications · 1.9K citations

    25

    h-index

  3. Proteins Structure Function and Bioinformatics

    22 publications · 2.1K citations

    19

    h-index

  4. BMC Bioinformatics

    25 publications · 1.2K citations

    18

    h-index

  5. PLoS ONE

    14 publications · 1.1K citations

    13

    h-index

1–5