Concepedia

Semi-supervised Cell Type Annotation

Semi-Supervised Cell Type Annotation is a computational method in single-cell transcriptomics that integrates limited labeled cell type information with a larger set of unlabeled data to improve the accuracy and scalability of cell type identification.

17

Publications

1.6K

Citations

90

Authors

31

Institutions

Publications per year

2017–2026

17

Parents

Publications

17

Probabilistic harmonization and annotation of single‐cell transcriptomics data with deep generative models

Chenling Xu, Romain Lopez, Edouard Mehlman et al. · Molecular Systems Biology · 2021 · 699 citations · Full text

, , +17

SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples

Ze Zhang, Danni Luo, Xue Zhong et al. · Genes · 2019 · 315 citations · Full text

, , +17

Evaluation of Cell Type Annotation R Packages on Single-Cell RNA-Seq Data

Qianhui Huang, Yu Liu, Yuheng Du et al. · Genomics Proteomics & Bioinformatics · 2020 · 158 citations · Full text

, , +15

Population-level integration of single-cell datasets enables multi-scale analysis across samples

Carlo De Donno, Soroor Hediyeh-zadeh, Amir Ali Moinfar et al. · Nature Methods · 2023 · 111 citations · Full text

, , +17

Single-cell RNA-seq data semi-supervised clustering and annotation via structural regularized domain adaptation

Liang Chen, Qiuyan He, Yuyao Zhai et al. · Bioinformatics · 2020 · 54 citations

, , +17

1–5 of 17

Authors

90

  1. SH
    Soroor Hediyeh-zadeh

    Walter and Eliza Hall Institute of Medical Research, Australia

    2 publications · 138 citations

    2

    h-index

  2. AA
    Amir Ali Moinfar

    Technical University of Munich, Germany

    2 publications · 138 citations

    2

    h-index

  3. MD
    Minghua Deng

    Peking University, China

    2 publications · 93 citations

    2

    h-index

  4. FJ
    Fabian J. Theis

    Helmholtz Zentrum München, Germany

    2 publications · 138 citations

    2

    h-index

  5. LZ
    Luke Zappia

    Helmholtz Zentrum München, Germany

    2 publications · 138 citations

    2

    h-index

1–5 of 90

Institutions

31

  1. Centre de Mathématiques Appliquées de l'École polytechnique

    Palaiseau, France

    2 h-index

    2 publications

    725 citations

  2. Wellcome Sanger Institute

    Cambridge, United Kingdom

    2 h-index

    4 publications

    276 citations

  3. Ragon Institute of MGH, MIT and Harvard

    Cambridge, United States

    2 h-index

    2 publications

    725 citations

  4. Peking University

    Beijing, China

    2 h-index

    6 publications

    279 citations

  5. Helmholtz Zentrum München

    Munich, Germany

    2 h-index

    14 publications

    966 citations

  6. Technical University of Munich

    Munich, Germany

    2 h-index

    8 publications

    552 citations

  7. University of Michigan

    Ann Arbor, United States

    2 h-index

    5 publications

    1.3K citations

  8. University of California, Berkeley

    Berkeley, United States

    2 h-index

    11 publications

    3.7K citations

1–8 of 31

Venues

  1. Bioinformatics

    5 publications · 148 citations

    5

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 3 publications · 64 citations

    3

    h-index

  3. Molecular Systems Biology

    1 publications · 699 citations

    1

    h-index

  4. Briefings in Bioinformatics

    1 publications · 23 citations

    1

    h-index

  5. BMC Genomics

    1 publications · 28 citations

    1

    h-index

1–5