Concepedia

Regulatory Element Annotation

Regulatory Element Annotation is the systematic identification and classification of genomic regions that modulate gene expression—such as promoters, enhancers, silencers, and insulators—by integrating epigenomic profiling data with genome annotation frameworks to delineate their functional roles in transcriptional regulation.

188

Publications

30.8K

Citations

2K

Authors

449

Institutions

Publications per year

2017–2026

62

Parents

Publications

188

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Federico Abascal, Reyes Acosta, Nicholas J. Addleman et al. · Nature · 2020 · 2.6K citations · Full text

, , +15

PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

Jinpu Jin, Feng Tian, De-Chang Yang et al. · Nucleic Acids Research · 2016 · 2.5K citations · Full text

, , +17

TRANSFAC(R) and its module TRANSCompel(R): transcriptional gene regulation in eukaryotes

Volker Matys · Nucleic Acids Research · 2005 · 2.2K citations · Full text

, , +14

A comparative encyclopedia of DNA elements in the mouse genome

Feng Yue, Yong Cheng, Alessandra Breschi et al. · Nature · 2014 · 1.9K citations · Full text

, , +17

Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL

T. Heinemeyer · Nucleic Acids Research · 1998 · 1.5K citations · Full text

, , +17

1–5 of 188

Authors

2K

  1. PF
    Paul Flicek

    European Bioinformatics Institute, United Kingdom

    9 publications · 6.5K citations

    8

    h-index

  2. AK
    Anshul Kundaje

    Stanford University, United States

    6 publications · 8K citations

    7

    h-index

  3. WW
    Wyeth W. Wasserman

    University of British Columbia, Canada

    7 publications · 1.6K citations

    7

    h-index

  4. CB
    Casey Bergman

    University of Manchester, United Kingdom

    6 publications · 877 citations

    6

    h-index

  5. RC
    Ross C. Hardison

    Pennsylvania State University, United States

    7 publications · 6K citations

    6

    h-index

1–5 of 2K

Institutions

449

  1. European Bioinformatics Institute

    Cambridge, United Kingdom

    10 h-index

    242 publications

    161.9K citations

  2. Harvard University

    Cambridge, United States

    9 h-index

    67 publications

    38.1K citations

  3. Broad Institute

    Cambridge, United States

    9 h-index

    65 publications

    71K citations

  4. Lawrence Berkeley National Laboratory

    Berkeley, United States

    9 h-index

    63 publications

    59.1K citations

  5. University of British Columbia

    Vancouver, Canada

    9 h-index

    56 publications

    10.4K citations

  6. National Institutes of Health

    Bethesda, United States

    8 h-index

    78 publications

    66.8K citations

  7. Massachusetts Institute of Technology

    Cambridge, United States

    8 h-index

    90 publications

    116.6K citations

  8. University of Washington

    Seattle, United States

    8 h-index

    65 publications

    89.7K citations

1–8 of 449

Venues

  1. Nucleic Acids Research

    53 publications · 14.5K citations

    43

    h-index

  2. Bioinformatics

    10 publications · 940 citations

    10

    h-index

  3. Genome Research

    GR · 8 publications · 1.4K citations

    8

    h-index

  4. Genome biology

    8 publications · 737 citations

    8

    h-index

  5. BMC Genomics

    7 publications · 231 citations

    7

    h-index

1–5