Concepedia

Reference-guided Haplotype Assembly

Reference-Guided Haplotype Assembly is a haplotype-resolved assembly method that leverages a known reference genome to inform and constrain the phasing of heterozygous variants and the reconstruction of haplotypes from sequencing data.

8

Publications

303

Citations

70

Authors

41

Institutions

Publications per year

2017–2026

8

Variants

Reference-based Haplotype Assembly

Parents

Publications

8

Markhor-derived Introgression of a Genomic Region Encompassing<i>PAPSS2</i>Confers High-altitude Adaptability in Tibetan Goats

Chao Li, Yujiang Wu, Bingchun Chen et al. · Molecular Biology and Evolution · 2022 · 53 citations · Full text

, , +13

phasebook: haplotype-aware de novo assembly of diploid genomes from long reads

Xiao Luo, Xiongbin Kang, Alexander Schönhuth · Genome biology · 2021 · 52 citations · Full text

, , +17

Full-length <i>de novo</i> viral quasispecies assembly through variation graph construction

Jasmijn A. Baaijens, Bastiaan van der Roest, Johannes Köster et al. · Bioinformatics · 2019 · 49 citations · Full text

, , +14

Complete RHD next-generation sequencing: establishment of reference RHD alleles

Wajnat A. Tounsi, Tracey E. Madgett, Neil D. Avent · Blood Advances · 2018 · 41 citations · Full text

, , +14

Stack Mapping Anchor Points (SMAP): a versatile suite of tools for read-backed haplotyping

Dries Schaumont, Elisabeth Veeckman, Felix Van der Jeugt et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2022 · 35 citations · Full text

, , +17

1–5 of 8

Authors

70

  1. AS
    Alexander Schönhuth

    Centrum Wiskunde & Informatica, Netherlands

    2 publications · 101 citations

    2

    h-index

  2. AS
    Alexander S. Leonard

    ETH Zurich, Switzerland

    1 publications · 53 citations

    1

    h-index

  3. TE
    Tracey E. Madgett

    University of Plymouth, United Kingdom

    1 publications · 41 citations

    1

    h-index

  4. JK
    Johannes Köster

    University of Duisburg-Essen, Germany

    1 publications · 49 citations

    1

    h-index

  5. YW
    Yimin Wang

    Southeast University, China

    1 publications · 22 citations

    1

    h-index

1–5 of 70

Institutions

41

  1. ETH Zurich

    Zurich, Switzerland

    2 h-index

    6 publications

    218 citations

  2. Northwest A&F University

    Yangling, China

    2 h-index

    22 publications

    866 citations

  3. Centrum Wiskunde & Informatica

    Amsterdam, The Netherlands

    2 h-index

    6 publications

    303 citations

  4. Research Institute of Animal Husbandry

    Ulaanbaatar, Mongolia

    1 h-index

    1 publications

    53 citations

  5. Shanghai Institute of Nutrition and Health

    Shanghai, China

    1 h-index

    7 publications

    154 citations

  6. University of Plymouth

    Plymouth, United Kingdom

    1 h-index

    3 publications

    123 citations

  7. Guangzhou Zoo

    Guangzhou, China

    1 h-index

    2 publications

    106 citations

  8. Bielefeld University

    Bielefeld, Germany

    1 h-index

    3 publications

    156 citations

1–8 of 41

Venues

  1. Blood Advances

    1 publications · 41 citations

    1

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 1 publications · 35 citations

    1

    h-index

  3. BMC Genomics

    1 publications · 28 citations

    1

    h-index

  4. Bioinformatics

    1 publications · 49 citations

    1

    h-index

  5. Cell Systems

    1 publications · 22 citations

    1

    h-index

1–5