Concepedia

Reference Genome Mapping

Reference Genome Mapping is a computational method in pathogen sequence analysis that aligns sequencing reads to a known reference genome to identify variations and infer genomic structure.

464

Publications

53.9K

Citations

3.1K

Authors

925

Institutions

Publications per year

2017–2026

216

Parents

Publications

464

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

Robert J. Elshire, Jeffrey C. Glaubitz, Qi Sun et al. · PLoS ONE · 2011 · 6.8K citations · Full text

, , +14

The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote

Yang Liao, Gordon K. Smyth, Wei Shi · Nucleic Acids Research · 2013 · 3.4K citations · Full text

, , +17

Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data

Yoshihiro Kawahara, M. de la Bastide, John P. Hamilton et al. · Rice · 2013 · 2.5K citations · Full text

, , +17

FastQ Screen: A tool for multi-genome mapping and quality control

Steven Wingett, Simon Andrews · F1000Research · 2018 · 1.8K citations · Full text

, , +13

FastQ Screen: A tool for multi-genome mapping and quality control

Steven Wingett, Simon Andrews · F1000Research · 2018 · 1.5K citations · Full text

, , +13

1–5 of 464

Authors

3.1K

  1. SK
    Sergey Koren

    National Human Genome Research Institute, United States

    8 publications · 2.7K citations

    8

    h-index

  2. AM
    Adam M. Phillippy

    National Human Genome Research Institute, United States

    8 publications · 2.7K citations

    8

    h-index

  3. SL
    Stefano Lonardi

    University of California, Riverside, United States

    6 publications · 320 citations

    6

    h-index

  4. HL
    Heng Li

    Harvard University, United States

    5 publications · 1.6K citations

    5

    h-index

  5. YY
    Yeisoo Yu

    University of Arizona, United States

    5 publications · 418 citations

    5

    h-index

1–5 of 3.1K

Institutions

925

  1. Centre National de la Recherche Scientifique

    Paris, France

    12 h-index

    42 publications

    3.2K citations

  2. Harvard University

    Cambridge, United States

    12 h-index

    30 publications

    2.7K citations

  3. Chinese Academy of Sciences

    Beijing, China

    12 h-index

    98 publications

    6.6K citations

  4. Agricultural Research Service

    Washington, United States

    11 h-index

    23 publications

    19.6K citations

  5. National Institutes of Health

    Bethesda, United States

    11 h-index

    50 publications

    23.2K citations

  6. Wellcome Sanger Institute

    Cambridge, United Kingdom

    10 h-index

    40 publications

    17.3K citations

  7. Chinese Academy of Agricultural Sciences

    Beijing, China

    10 h-index

    102 publications

    11.7K citations

  8. Cold Spring Harbor Laboratory

    Cold Spring Harbor, United States

    10 h-index

    36 publications

    23.4K citations

1–8 of 925

Venues

  1. Bioinformatics

    42 publications · 5.1K citations

    30

    h-index

  2. PLoS ONE

    36 publications · 9.2K citations

    26

    h-index

  3. BMC Genomics

    40 publications · 2.7K citations

    25

    h-index

  4. BMC Bioinformatics

    19 publications · 2.7K citations

    17

    h-index

  5. Frontiers in Plant Science

    12 publications · 311 citations

    12

    h-index

1–5