Concepedia

Reference Genome Comparison

Reference Genome Comparison is a structural variant analysis method that identifies and characterizes genomic divergences by aligning and evaluating sequence organization, content, and synteny between a target fish genome and a standardized reference genome.

284

Publications

37.9K

Citations

2.8K

Authors

816

Institutions

Publications per year

2017–2026

168

Parents

Publications

284

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

Donovan H. Parks, Michael Imelfort, Connor T. Skennerton et al. · Genome Research · 2015 · 12.8K citations · Full text

, , +17

The zebrafish reference genome sequence and its relationship to the human genome

Kerstin Howe, Matthew D. Clark, Carlos Torroja et al. · Nature · 2013 · 5.1K citations · Full text

, , +17

CrossMap: a versatile tool for coordinate conversion between genome assemblies

Hao Zhao, Zhifu Sun, Jing Wang et al. · Bioinformatics · 2013 · 868 citations · Full text

, , +14

Performance of genetic programming optimised Bowtie2 on genome comparison and analytic testing (GCAT) benchmarks

William B. Langdon · BioData Mining · 2015 · 706 citations · Full text

, , +13

Comparative mapping and marker-assisted selection in Rosaceae fruit crops

Elisabeth Dirlewanger, Enrique Graziano, Tarek Joobeur et al. · Proceedings of the National Academy of Sciences · 2004 · 537 citations · Full text

, , +15

1–5 of 284

Authors

2.8K

  1. AM
    Adam M. Phillippy

    National Human Genome Research Institute, United States

    5 publications · 865 citations

    5

    h-index

  2. AR
    Arang Rhie

    National Human Genome Research Institute, United States

    4 publications · 573 citations

    4

    h-index

  3. BF
    Ben F. Koop

    University of Victoria, Canada

    4 publications · 580 citations

    4

    h-index

  4. SK
    Sergey Koren

    National Human Genome Research Institute, United States

    4 publications · 840 citations

    4

    h-index

  5. JM
    Justin M. Zook

    National Institute of Standards and Technology, United States

    4 publications · 699 citations

    4

    h-index

1–5 of 2.8K

Institutions

816

  1. Agricultural Research Service

    Washington, United States

    16 h-index

    68 publications

    6.6K citations

  2. Chinese Academy of Sciences

    Beijing, China

    13 h-index

    40 publications

    2.3K citations

  3. University of California, Davis

    Davis, United States

    12 h-index

    39 publications

    4.8K citations

  4. Centre National de la Recherche Scientifique

    Paris, France

    11 h-index

    24 publications

    11K citations

  5. National Institutes of Health

    Bethesda, United States

    10 h-index

    27 publications

    2.2K citations

  6. United States Department of Agriculture

    Washington, United States

    10 h-index

    19 publications

    1.1K citations

  7. Wellcome Sanger Institute

    Cambridge, United Kingdom

    9 h-index

    162 publications

    706.5K citations

  8. Howard Hughes Medical Institute

    Chevy Chase, United States

    8 h-index

    13 publications

    2.3K citations

1–8 of 816

Venues

  1. BMC Genomics

    36 publications · 1.8K citations

    26

    h-index

  2. PLoS ONE

    15 publications · 775 citations

    13

    h-index

  3. Genome Research

    GR · 9 publications · 13.3K citations

    9

    h-index

  4. Genome biology

    8 publications · 1.3K citations

    8

    h-index

  5. Frontiers in Genetics

    8 publications · 284 citations

    8

    h-index

1–5