Concepedia

Read Depth Analysis

Read Depth Analysis is a computational method in genomics that quantifies variations in DNA copy number by measuring the relative depth of sequencing reads aligned to a reference genome, distinguishing itself from other structural variation detection approaches through its reliance on the statistical distribution of read coverage to infer duplications or deletions.

167

Publications

15.9K

Citations

1.4K

Authors

501

Institutions

Publications per year

2017–2026

78

Parents

Publications

167

CNVkit: Genome-Wide Copy Number Detection and Visualization from Targeted DNA Sequencing

Eric Talevich, A. Hunter Shain, Thomas Botton et al. · PLoS Computational Biology · 2016 · 2.3K citations · Full text

, , +17

Characterization of human plasma-derived exosomal RNAs by deep sequencing

Xiaoyi Huang, Tiezheng Yuan, Michael Tschannen et al. · BMC Genomics · 2013 · 1.1K citations · Full text

, , +16

A robust model for read count data in exome sequencing experiments and implications for copy number variant calling

Vincent Plagnol, James Curtis, Michael P. Epstein et al. · Bioinformatics · 2012 · 753 citations · Full text

, , +17

Atlas of the clinical genetics of human dilated cardiomyopathy

Jan Haas, Karen Frese, Barbara Peil et al. · European Heart Journal · 2014 · 568 citations · Full text

, , +13

Prevalence of Homologous Recombination–Related Gene Mutations Across Multiple Cancer Types

Arielle L. Heeke, Michael J. Pishvaian, Filipa Lynce et al. · JCO Precision Oncology · 2018 · 465 citations

, , +17

1–5 of 167

Authors

1.4K

  1. JD
    John D. Storey

    Princeton University, United States

    5 publications · 192 citations

    5

    h-index

  2. DG
    David G. Robinson

    Princeton University, United States

    5 publications · 192 citations

    5

    h-index

  3. VP
    Vincent Plagnol

    University College London, United Kingdom

    4 publications · 1.5K citations

    4

    h-index

  4. LC
    Lachlan Coin

    Imperial College London, United Kingdom

    4 publications · 82 citations

    4

    h-index

  5. FJ
    Francisco J. Pardo-Palacios

    University of Florida, United States

    3 publications · 290 citations

    3

    h-index

1–5 of 1.4K

Institutions

501

  1. University College London

    London, United Kingdom

    9 h-index

    49 publications

    15.8K citations

  2. University of Cambridge

    Cambridge, United Kingdom

    9 h-index

    33 publications

    12K citations

  3. Cornell University

    Ithaca, United States

    8 h-index

    21 publications

    1.4K citations

  4. Harvard University

    Cambridge, United States

    7 h-index

    22 publications

    2.6K citations

  5. Wellcome Sanger Institute

    Cambridge, United Kingdom

    7 h-index

    22 publications

    2.2K citations

  6. University of California, San Francisco

    San Francisco, United States

    6 h-index

    19 publications

    10.4K citations

  7. University of Washington

    Seattle, United States

    5 h-index

    13 publications

    1.4K citations

  8. Princeton University

    Princeton, United States

    5 h-index

    14 publications

    516 citations

1–8 of 501

Venues

  1. BMC Genomics

    17 publications · 2.1K citations

    15

    h-index

  2. PLoS ONE

    10 publications · 1.1K citations

    10

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 9 publications · 165 citations

    9

    h-index

  4. Frontiers in Genetics

    7 publications · 212 citations

    7

    h-index

  5. Bioinformatics

    7 publications · 1K citations

    7

    h-index

1–5