Concepedia

Pseudoknots

Pseudoknots is a tertiary structure motif in nucleic acids characterized by a stem-loop structure in which a loop region pairs with a complementary sequence outside the stem, forming a second stem that intercalates with the first, thereby creating a knotted conformation.

201

Publications

14.9K

Citations

540

Authors

237

Institutions

Publications per year

2017–2026

22

Parents

Publications

201

A dynamic programming algorithm for RNA structure prediction including pseudoknots 1 1Edited by I. Tinoco

Elena Rivas, Sean R. Eddy · Journal of Molecular Biology · 1999 · 768 citations

, , +11

RNA pseudoknots that inhibit human immunodeficiency virus type 1 reverse transcriptase.

C Tuerk, Sheela Macdougal, Larry Gold · Proceedings of the National Academy of Sciences · 1992 · 424 citations

, , +17

RNA Pseudoknot Prediction in Energy-Based Models

Rune B. Lyngsø, Christian N. S. Pedersen · Journal of Computational Biology · 2000 · 379 citations

, , +15

A partition function algorithm for nucleic acid secondary structure including pseudoknots

Robert M. Dirks, Niles A. Pierce · Journal of Computational Chemistry · 2003 · 375 citations

, , +16

Pseudoknots: RNA Structures with Diverse Functions

David W. Staple, Samuel E. Butcher · PLoS Biology · 2005 · 366 citations · Full text

, , +14

1–5 of 201

Authors

540

  1. DG
    David Giedroc

    Indiana University Bloomington, United States

    9 publications · 377 citations

    9

    h-index

  2. CW
    Cornelis W.A. Pleij

    Leiden University, Netherlands

    7 publications · 566 citations

    7

    h-index

  3. CM
    Christian M. Reidys

    Nankai University, China

    7 publications · 193 citations

    7

    h-index

  4. DW
    David W. Hoffman

    The University of Texas at Austin, United States

    6 publications · 259 citations

    6

    h-index

  5. ZD
    Zhihua Du

    Shenzhen University, China

    6 publications · 243 citations

    6

    h-index

1–5 of 540

Institutions

237

  1. Leiden University

    Leiden, The Netherlands

    14 h-index

    35 publications

    2.8K citations

  2. Howard Hughes Medical Institute

    Chevy Chase, United States

    8 h-index

    13 publications

    1.6K citations

  3. University of Alberta

    Edmonton, Canada

    7 h-index

    28 publications

    1.7K citations

  4. Texas A&M University

    College Station, United States

    7 h-index

    19 publications

    650 citations

  5. University of California, Berkeley

    Berkeley, United States

    7 h-index

    13 publications

    1.4K citations

  6. Nankai University

    Tianjin, China

    6 h-index

    13 publications

    430 citations

  7. The University of Texas at Austin

    Austin, United States

    6 h-index

    20 publications

    821 citations

  8. University of Missouri

    Columbia, United States

    6 h-index

    17 publications

    1.1K citations

1–8 of 237

Venues

  1. Nucleic Acids Research

    37 publications · 2.7K citations

    30

    h-index

  2. Journal of Molecular Biology

    JMB · 16 publications · 2K citations

    16

    h-index

  3. RNA

    18 publications · 1.3K citations

    16

    h-index

  4. Proceedings of the National Academy of Sciences

    PNAS · 11 publications · 1.4K citations

    11

    h-index

  5. Bioinformatics

    9 publications · 439 citations

    9

    h-index

1–5