Concepedia

Protein-coding Sequence Prediction

Protein-Coding Sequence Prediction is the computational task of identifying regions within metagenomic DNA sequences that are likely to encode proteins, distinguished from related sequence annotation tasks by its specific focus on delineating open reading frames with evidence of translational potential and evolutionary conservation consistent with functional gene products.

131

Publications

15.1K

Citations

570

Authors

255

Institutions

Publications per year

2017–2026

28

Parents

Publications

131

Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources

Mario Stanke, Oliver Schöffmann, Burkhard Morgenstern et al. · BMC Bioinformatics · 2006 · 1.4K citations · Full text

, , +17

Ab initio Gene Finding in <i>Drosophila</i> Genomic DNA

Asaf Salamov, Victor Solovyev · Genome Research · 2000 · 1.2K citations · Full text

, , +17

Recognition of protein coding regions in DNA sequences

James W. Fickett · Nucleic Acids Research · 1982 · 914 citations · Full text

, , +15

FragGeneScan: predicting genes in short and error-prone reads

Mina Rho, Haixu Tang, Yuzhen Ye · Nucleic Acids Research · 2010 · 896 citations · Full text

, , +17

Genomic Analysis of Organismal Complexity in the Multicellular Green Alga <i>Volvox carteri</i>

Simon Prochnik, James Umen, Aurora M. Nedelcu et al. · Science · 2010 · 624 citations

, , +17

1–5 of 131

Authors

570

  1. MB
    Mark Borodovsky

    Georgia Institute of Technology, United States

    10 publications · 827 citations

    10

    h-index

  2. TN
    Takahiro Nagase

    Kazusa DNA Research Institute, Japan

    4 publications · 736 citations

    4

    h-index

  3. MS
    Mario Stanke

    Universität Greifswald, Germany

    3 publications · 1.8K citations

    3

    h-index

  4. MR
    Michael R. Brent

    Washington University in St. Louis, United States

    3 publications · 202 citations

    3

    h-index

  5. IA
    Ivan Antonov

    Moscow Institute of Physics and Technology, Russia

    3 publications · 71 citations

    3

    h-index

1–5 of 570

Institutions

255

  1. Georgia Institute of Technology

    Atlanta, United States

    10 h-index

    25 publications

    1.7K citations

  2. Kazusa DNA Research Institute

    Kisarazu, Japan

    9 h-index

    9 publications

    1.1K citations

  3. Centre National de la Recherche Scientifique

    Paris, France

    6 h-index

    15 publications

    827 citations

  4. The Wallace H. Coulter Department of Biomedical Engineering

    Atlanta, United States

    5 h-index

    8 publications

    592 citations

  5. European Bioinformatics Institute

    Cambridge, United Kingdom

    4 h-index

    15 publications

    1.1K citations

  6. Washington University in St. Louis

    St Louis, United States

    4 h-index

    6 publications

    857 citations

  7. Joint Genome Institute

    Berkeley, United States

    4 h-index

    24 publications

    11.1K citations

  8. European Molecular Biology Laboratory

    Hamburg, Germany

    3 h-index

    6 publications

    1K citations

1–8 of 255

Venues

  1. Nucleic Acids Research

    18 publications · 3.1K citations

    17

    h-index

  2. BMC Bioinformatics

    15 publications · 2.7K citations

    15

    h-index

  3. Genome Research

    GR · 14 publications · 2.6K citations

    14

    h-index

  4. Bioinformatics

    9 publications · 565 citations

    9

    h-index

  5. DNA Research

    9 publications · 1.1K citations

    9

    h-index

1–5