Concepedia

Protein Sequence Alignment Scoring

Protein Sequence Alignment Scoring is a computational metric used in bioinformatics that quantifies the similarity between two protein sequences based on aligned residues, incorporating substitution matrices to distinguish biologically meaningful alignments from random matches.

65

Publications

8.5K

Citations

171

Authors

100

Institutions

Publications per year

2017–2026

0

Parents

Publications

65

Rapid and Sensitive Protein Similarity Searches

David J. Lipman, William R. Pearson · Science · 1985 · 4.1K citations

, , +16

Exhaustive Matching of the Entire Protein Sequence Database

Gastón H. Gonnet, Mark A. Cohen, Steven A. Benner · Science · 1992 · 845 citations

, , +16

Improvement of the GenTHREADER method for genomic fold recognition

Liam J. McGuffin, David T. Jones · Bioinformatics · 2003 · 342 citations

, , +17

Caseins as rheomorphic proteins: interpretation of primary and secondary structures of the α<sub>S1</sub>-, β- and κ-caseins

Carl Holt, Lindsay Sawyer · Journal of the Chemical Society Faraday Transactions · 1993 · 264 citations

, , +17

Evolutionary HMMs: a Bayesian approach to multiple alignment

Ian Holmes, William Bruno · Bioinformatics · 2001 · 180 citations · Full text

, , +16

1–5 of 65

Authors

171

  1. WR
    William R. Pearson

    University of Virginia, United States

    4 publications · 4.4K citations

    4

    h-index

  2. DW
    David W. Mount

    University of Arizona, United States

    3 publications · 133 citations

    3

    h-index

  3. RA
    Richard A. Goldstein

    University of Michigan, United States

    2 publications · 107 citations

    2

    h-index

  4. MS
    Michael S. Waterman

    University of Southern California, United States

    2 publications · 266 citations

    2

    h-index

  5. SF
    Stephen F. Altschul

    National Institutes of Health, United States

    2 publications · 165 citations

    2

    h-index

1–5 of 171

Institutions

100

  1. Centre National de la Recherche Scientifique

    Paris, France

    5 h-index

    10 publications

    622 citations

  2. University of California San Diego

    San Diego, United States

    3 h-index

    4 publications

    130 citations

  3. National Institutes of Health

    Bethesda, United States

    3 h-index

    5 publications

    213 citations

  4. University of Virginia

    Charlottesville, United States

    3 h-index

    5 publications

    4.4K citations

  5. Baylor College of Medicine

    Houston, United States

    2 h-index

    4 publications

    57 citations

  6. University of Edinburgh

    Edinburgh, United Kingdom

    2 h-index

    4 publications

    351 citations

  7. Laboratoire d'Informatique, de Robotique et de Microélectronique de Montpellier

    Montpellier, France

    2 h-index

    4 publications

    192 citations

  8. University of Arizona

    Tucson, United States

    2 h-index

    4 publications

    78 citations

1–8 of 100

Venues

  1. Bioinformatics

    9 publications · 683 citations

    9

    h-index

  2. BMC Bioinformatics

    7 publications · 245 citations

    7

    h-index

  3. Nucleic Acids Research

    5 publications · 441 citations

    5

    h-index

  4. Protein Engineering Design and Selection

    PEDS · 4 publications · 149 citations

    4

    h-index

  5. Computer applications in the biosciences

    CABIOS · 4 publications · 299 citations

    4

    h-index

1–5