Concepedia

Protein Inference

Protein Inference is the computational process of deducing the presence of specific proteins in a biological sample from the identification of peptides observed in mass spectrometry experiments, distinguished by its reliance on resolving the many-to-many relationship between peptides and proteins.

314

Publications

32.7K

Citations

1.5K

Authors

573

Institutions

Publications per year

2017–2026

104

Parents

Children

Publications

314

A Statistical Model for Identifying Proteins by Tandem Mass Spectrometry

Alexey I. Nesvizhskii, Andrew Keller, Eugene Kolker et al. · Analytical Chemistry · 2003 · 5K citations

, , +17

ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning

Ahmed Elnaggar, Michael Heinzinger, Christian Dallago et al. · IEEE Transactions on Pattern Analysis and Machine Intelligence · 2021 · 2.3K citations · Full text

, , +15

DTASelect and Contrast:  Tools for Assembling and Comparing Protein Identifications from Shotgun Proteomics

David L. Tabb, W. Hayes McDonald, John R. Yates · Journal of Proteome Research · 2002 · 1.4K citations

, , +17

A Smoothed Backbone-Dependent Rotamer Library for Proteins Derived from Adaptive Kernel Density Estimates and Regressions

Maxim V. Shapovalov, Roland L. Dunbrack · Structure · 2011 · 1.1K citations

, , +15

AlgPred: prediction of allergenic proteins and mapping of IgE epitopes

Sudipto Saha, Gajendra P. S. Raghava · Nucleic Acids Research · 2006 · 776 citations · Full text

, , +17

1–5 of 314

Authors

1.5K

  1. MD
    Minghua Deng

    Peking University, China

    6 publications · 1K citations

    6

    h-index

  2. MW
    Martin Weigt

    Sorbonne Université, France

    6 publications · 428 citations

    6

    h-index

  3. LK
    Lukas Käll

    Science for Life Laboratory, Sweden

    6 publications · 732 citations

    6

    h-index

  4. FS
    Fengzhu Sun

    University of Southern California, United States

    5 publications · 987 citations

    5

    h-index

  5. ME
    Martin Eisenacher

    Ruhr University Bochum, Germany

    5 publications · 297 citations

    5

    h-index

1–5 of 1.5K

Institutions

573

  1. Institute for Systems Biology

    Seattle, United States

    10 h-index

    28 publications

    21.1K citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    10 h-index

    32 publications

    2.2K citations

  3. Harvard University

    Cambridge, United States

    9 h-index

    29 publications

    2K citations

  4. Chinese Academy of Sciences

    Beijing, China

    9 h-index

    38 publications

    3.9K citations

  5. University of Washington

    Seattle, United States

    9 h-index

    19 publications

    6.2K citations

  6. Sorbonne Université

    Paris, France

    8 h-index

    21 publications

    1.1K citations

  7. Biologie Computationnelle, Quantitative et Synthétique

    Paris, France

    7 h-index

    17 publications

    998 citations

  8. Science for Life Laboratory

    Stockholm, Sweden

    7 h-index

    17 publications

    1.5K citations

1–8 of 573

Venues

  1. Bioinformatics

    32 publications · 3K citations

    25

    h-index

  2. Journal of Proteome Research

    JPR · 29 publications · 3.2K citations

    22

    h-index

  3. BMC Bioinformatics

    14 publications · 542 citations

    13

    h-index

  4. PLoS Computational Biology

    10 publications · 433 citations

    10

    h-index

  5. Molecular & Cellular Proteomics

    MCP · 10 publications · 522 citations

    10

    h-index

1–5