Concepedia

Database Search-based Inference

Database Search-Based Inference is a protein inference method that identifies proteins by matching tandem mass spectrometry data to theoretical spectra derived from a protein sequence database, distinguishing itself from de novo or homology-based approaches through its reliance on explicit database lookup and scoring of peptide-spectrum matches.

13

Publications

896

Citations

64

Authors

31

Institutions

Publications per year

2017–2026

2

Parents

Publications

13

GutenTag:  High-Throughput Sequence Tagging via an Empirically Derived Fragmentation Model

David L. Tabb, Anita Saraf, John R. Yates · Analytical Chemistry · 2003 · 275 citations · Full text

, , +17

Protein identification using MS/MS data

John S. Cottrell · Journal of Proteomics · 2011 · 206 citations · Full text

, , +17

In-depth analysis of protein inference algorithms using multiple search engines and well-defined metrics

Enrique Audain, Julian Uszkoreit, Timo Sachsenberg et al. · Journal of Proteomics · 2016 · 78 citations · Full text

, , +17

PIA: An Intuitive Protein Inference Engine with a Web-Based User Interface

Julian Uszkoreit, A. Maerkens, Yasset Pérez‐Riverol et al. · Journal of Proteome Research · 2015 · 74 citations · Full text

, , +17

EBP, a Program for Protein Identification Using Multiple Tandem Mass Spectrometry Datasets

Thomas S. Price, Margaret B. Lucitt, Weichen Wu et al. · Molecular & Cellular Proteomics · 2006 · 58 citations · Full text

, , +17

1–5 of 13

Authors

64

  1. YP
    Yasset Pérez‐Riverol

    European Bioinformatics Institute, United Kingdom

    3 publications · 185 citations

    3

    h-index

  2. JU
    Julian Uszkoreit

    Ruhr University Bochum, Germany

    2 publications · 152 citations

    2

    h-index

  3. ME
    Martin Eisenacher

    Ruhr University Bochum, Germany

    2 publications · 152 citations

    2

    h-index

  4. HH
    Henning Hermjakob

    European Bioinformatics Institute, United Kingdom

    2 publications · 119 citations

    2

    h-index

  5. DL
    David L. Tabb

    Vanderbilt University, United States

    2 publications · 353 citations

    2

    h-index

1–5 of 64

Institutions

31

  1. Wellcome Trust

    London, United Kingdom

    3 h-index

    6 publications

    312 citations

  2. European Bioinformatics Institute

    Cambridge, United Kingdom

    3 h-index

    6 publications

    312 citations

  3. Ruhr University Bochum

    Bochum, Germany

    2 h-index

    10 publications

    748 citations

  4. Netherlands Metabolomics Centre

    Utrecht, The Netherlands

    2 h-index

    2 publications

    74 citations

  5. University of Tübingen

    Tübingen, Germany

    1 h-index

    3 publications

    234 citations

  6. Max Planck Institute for Developmental Biology

    Tübingen, Germany

    1 h-index

    1 publications

    78 citations

  7. University of Pennsylvania

    Philadelphia, United States

    1 h-index

    8 publications

    464 citations

  8. Lund University

    Lund, Sweden

    1 h-index

    1 publications

    78 citations

1–8 of 31

Venues

  1. Journal of Proteome Research

    JPR · 2 publications · 107 citations

    2

    h-index

  2. Molecular & Cellular Proteomics

    MCP · 2 publications · 99 citations

    2

    h-index

  3. Journal of Proteomics

    2 publications · 284 citations

    2

    h-index

  4. Journal of the American Chemical Society

    JACS · 1 publications · 50 citations

    1

    h-index

  5. 1

    h-index

1–5