SAINTexpress: Improvements and additional features in Significance Analysis of INTeractome software

Guoci Teo, Guomin Liu, Jianping Zhang, +3

Journal of Proteomics

EngineeringGeneticsBioinformatics DatabaseSoftware AnalysisData Science +14

ProLuCID: An improved SEQUEST-like algorithm with enhanced sensitivity and specificity

Tao Xu, S.K. Park, John D. Venable, +13

Journal of Proteomics

In-depth analysis of the human tear proteome

Lei Zhou, Shao Zhao, Siew Kwan Koh, +5

Journal of Proteomics

Proteomic TechnologyMedicineHuman Tear ProteomeProteomicsCell Biology +2

Secreted protein eco-corona mediates uptake and impacts of polystyrene nanoparticles on Daphnia magna

Fatima Nasser, Iseult Lynch

Journal of Proteomics

imzML — A common data format for the flexible exchange and processing of mass spectrometry imaging data

Thorsten Schramm, Ivo Klinkert, Jean-Pierre Both, +8

Journal of Proteomics

EngineeringAnalytical InstrumentationData ScienceFlexible ExchangeMass Spectrometry +9

Characterization and proteomic analysis of ovarian cancer-derived exosomes

Bing Liang, Peng Peng, She Chen, +8

Journal of Proteomics

Proteomic TechnologyTumor BiologyMedicineNatural SciencesOvarian Cancer-derived Exosomes +5

Systematic and quantitative comparison of digest efficiency and specificity reveals the impact of trypsin quality on MS-based proteomics

Julia M. Burkhart, Cornelia Schumbrutzki, Stefanie Wortelkamp, +2

Journal of Proteomics

BiochemistryMedicineNatural SciencesPathologyMs-based Proteomics +8

Oxidative stress, inflamm-aging and immunosenescence

Elvira Stefania Cannizzo, Cristina C. Clement, Ranjit Kumar Sahu, +2

Journal of Proteomics

Inclusive sharing of mass spectrometry imaging data requires a converter for all

Alan Race, Iain B. Styles, Josephine Bunch

Journal of Proteomics

EngineeringAnalytical InstrumentationMedical ImagingAdvanced ImagingMass Spectrometry +8

Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes

Jean‐Philippe Lambert, Monika Tucholska, Christopher D. Go, +2

Journal of Proteomics

ChromatinInteractome MappingChromatin RemodelingInteractomicsMedicine +11