Concepedia

Prophage Detection

Prophage Detection is a computational method in viral metagenomics that identifies latent bacteriophage genomes integrated into bacterial host DNA through sequence-based analysis and genomic signature profiling.

52

Publications

10.6K

Citations

326

Authors

136

Institutions

Publications per year

2017–2026

23

Parents

Publications

52

PHASTER: a better, faster version of the PHAST phage search tool

David Arndt, Jason R. Grant, Ana Marcu et al. · Nucleic Acids Research · 2016 · 3.8K citations · Full text

, , +12

PHAST: A Fast Phage Search Tool

You Zhou, Yong Liang, Karlene H. Lynch et al. · Nucleic Acids Research · 2011 · 2.1K citations · Full text

, , +17

VirSorter: mining viral signal from microbial genomic data

Simon Roux, François Enault, Bonnie L. Hurwitz et al. · PeerJ · 2015 · 1.2K citations · Full text

, , +16

PHASTEST: faster than PHASTER, better than PHAST

David S. Wishart, Scott Han, Sukanta Saha et al. · Nucleic Acids Research · 2023 · 589 citations · Full text

, , +11

PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies

Sajia Akhter, Ramy K. Aziz, Robert A. Edwards · Nucleic Acids Research · 2012 · 581 citations · Full text

, , +16

1–5 of 52

Authors

326

  1. RA
    Robert A. Edwards

    San Diego State University, United States

    3 publications · 642 citations

    3

    h-index

  2. DS
    David S. Wishart

    University of Alberta, Canada

    3 publications · 6.4K citations

    3

    h-index

  3. KM
    Katelyn McNair

    San Diego State University, United States

    2 publications · 61 citations

    2

    h-index

  4. JR
    Jason R. Grant

    University of Alberta, Canada

    2 publications · 4.3K citations

    2

    h-index

  5. TS
    Tomáš Szemes

    Comenius University Bratislava, Slovakia

    2 publications · 38 citations

    2

    h-index

1–5 of 326

Institutions

136

  1. San Diego State University

    San Diego, United States

    4 h-index

    14 publications

    2.1K citations

  2. University of Alberta

    Edmonton, Canada

    3 h-index

    20 publications

    41.5K citations

  3. University of Guelph

    Guelph, Canada

    2 h-index

    4 publications

    67 citations

  4. Slovak Academy of Sciences

    Bratislava, Slovakia

    2 h-index

    2 publications

    38 citations

  5. University of Glasgow

    Glasgow, United Kingdom

    2 h-index

    5 publications

    136 citations

  6. Wageningen University & Research

    Wageningen, The Netherlands

    2 h-index

    5 publications

    147 citations

  7. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    2 h-index

    9 publications

    783 citations

  8. Food Research Institute

    Bratislava, Slovakia

    2 h-index

    2 publications

    353 citations

1–8 of 136

Venues

  1. Nucleic Acids Research

    6 publications · 7.4K citations

    6

    h-index

  2. Frontiers in Microbiology

    5 publications · 160 citations

    5

    h-index

  3. Virology

    3 publications · 112 citations

    3

    h-index

  4. PLoS ONE

    2 publications · 67 citations

    2

    h-index

  5. FEMS Microbiology Letters

    2 publications · 35 citations

    2

    h-index

1–5